HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:39.0 nTPM
HPA Brain:74.4 nTPM
GTEx:39.0 nTPM
FANTOM5:47.7 Scaled Tags Per Million
Pig:27.2 nTPM
Mouse:27.1 nTPM
Allen mouse:4.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA006280Antibody HPA006281Antibody CAB022071
Glial cells LowNot detectedLow
Neuronal cells MediumHighMedium







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 74.4
Sample id Sample description nTPM
Hippocampus
nTPM: 66.0
2621 Female, age 67, right hemisphere 71.6
1855 Male, age 76, left hemisphere 68.7
2148 Female, age 91, left hemisphere 68.0
2529 Female, age 94, left hemisphere 66.0
1911 Female, age 85, right hemisphere 63.3
1898 Male, age 80, left hemisphere 58.5
Dentate gyrus
nTPM: 65.5
2531 Female, age 67, both hemispheres 73.9
2246 Female, age 85, both hemispheres 70.9
2528 Male, age 74, both hemispheres 64.1
2530 Female, age 94, left hemisphere 62.7
1927 Female, age 91, both hemispheres 61.1
2010 Male, age 76, both hemispheres 60.0
Entorhinal gyrus
nTPM: 70.1
2764 Male, age 80, right hemisphere 78.6
2613 Female, age 94, left hemisphere 73.7
2686 Male, age 75, right hemisphere 72.3
2117 Female, age 91, right hemisphere 66.8
1787 Male, age 76, left hemisphere 65.4
1938 Female, age 85, left hemisphere 63.5
Hippocampus, CA1
nTPM: 65.5
2749 Male, age 80, left hemisphere 78.6
2527 Male, age 74, both hemispheres 64.9
2082 Female, age 91, right hemisphere 63.9
1873 Female, age 85, both hemispheres 60.7
2045 Male, age 76, both hemispheres 59.6
Hippocampus, CA2
nTPM: 61.8
2437 Female, age 94, left hemisphere 67.6
2113 Female, age 91, right hemisphere 64.4
1940 Female, age 85, left hemisphere 63.0
1963 Male, age 80, left hemisphere 60.1
2249 Male, age 74, both hemispheres 58.7
1892 Male, age 76, both hemispheres 57.0
Hippocampus, CA3
nTPM: 71.7
2620 Female, age 94, left hemisphere 86.2
2137 Male, age 80, left hemisphere 82.5
2861 Female, age 67, both hemispheres 67.8
1891 Female, age 85, both hemispheres 66.5
1867 Male, age 76, both hemispheres 65.8
2436 Male, age 74, both hemispheres 61.3
Parahippocampal cortex
nTPM: 66.7
2692 Male, age 74, both hemispheres 72.3
2693 Female, age 94, both hemispheres 72.2
2532 Female, age 72, left hemisphere 72.1
1850 Male, age 80, both hemispheres 69.9
2622 Female, age 67, right hemisphere 69.6
2245 Female, age 91, both hemispheres 65.1
1933 Female, age 85, both hemispheres 64.7
2018 Male, age 76, both hemispheres 63.6
1990 Female, age 91, right hemisphere 61.9
2250 Female, age 67, right hemisphere 55.5
Perirhinal gyrus
nTPM: 66.3
1847 Female, age 91, left hemisphere 71.4
1794 Male, age 80, right hemisphere 67.5
2521 Female, age 94, right hemisphere 66.9
2848 Male, age 76, right hemisphere 64.7
1841 Female, age 85, right hemisphere 61.1
Subiculum
nTPM: 74.4
2438 Female, age 94, left hemisphere 82.9
2042 Male, age 76, both hemispheres 78.5
1901 Male, age 80, both hemispheres 75.7
2619 Male, age 74, both hemispheres 74.6
2729 Female, age 91, right hemisphere 68.4
1977 Female, age 85, both hemispheres 66.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 39.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 39.0
Samples: 197

Max nTPM: 63.3
Min nTPM: 26.3
Std nTPM: 6.5
Median nTPM: 38.4
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 63.3
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 59.3
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 57.5
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 57.2
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 54.3
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 53.9
GTEX-1I1GV-0011-R1a-SM-CL559 60-69 years, male 53.6
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 52.6
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 51.7
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 50.7
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 50.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 47.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 47.7
FF:10153-102I9 76 years, female 55.0
FF:10169-103B7 60 years, female 40.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 27.2
Pig sample Sample description nTPM
Subiculum
nTPM: 26.5
Samples: 4

Max nTPM: 32.0
Min nTPM: 22.9
Sample A Female 32.0
Sample B Female 25.0
Sample C Male 26.2
Sample D Male 22.9
Dorsal hippocampus
nTPM: 26.3
Samples: 4

Max nTPM: 30.6
Min nTPM: 22.2
Sample A Female 30.6
Sample B Female 27.6
Sample C Male 24.8
Sample D Male 22.2
Entorhinal cortex
nTPM: 25.7
Samples: 4

Max nTPM: 28.6
Min nTPM: 24.2
Sample A Female 28.6
Sample B Female 24.2
Sample C Male 25.7
Sample D Male 24.4
Ventral hippocampus
nTPM: 27.2
Samples: 4

Max nTPM: 31.4
Min nTPM: 22.1
Sample A Female 27.7
Sample B Female 22.1
Sample C Male 31.4
Sample D Male 27.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 27.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 26.1
Samples: 4

Max nTPM: 29.3
Min nTPM: 24.5
Sample A Male 24.7
Sample B Male 25.9
Sample C Female 29.3
Sample D Female 24.5
Hippocampal formation
nTPM: 27.1
Samples: 4

Max nTPM: 30.2
Min nTPM: 24.8
Sample A Male 30.2
Sample B Male 26.7
Sample C Female 24.8
Sample D Female 26.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.0
69262117 Antisense, RP_050224_01_B02, Mouse strain C57BL/6J (56 days, male) 4.0

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