HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:11.6 nTPM
HPA Brain:32.0 nTPM
GTEx:11.6 nTPM
FANTOM5:43.0 Scaled Tags Per Million
Pig:40.0 nTPM
Mouse:45.7 nTPM
Allen mouse:11.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA029366
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 32.0
Sample id Sample description nTPM
Hippocampus
nTPM: 27.7
2148 Female, age 91, left hemisphere 31.0
1911 Female, age 85, right hemisphere 30.9
1855 Male, age 76, left hemisphere 28.5
2529 Female, age 94, left hemisphere 26.8
2621 Female, age 67, right hemisphere 24.4
1898 Male, age 80, left hemisphere 24.3
Dentate gyrus
nTPM: 29.3
2246 Female, age 85, both hemispheres 32.0
1927 Female, age 91, both hemispheres 31.0
2010 Male, age 76, both hemispheres 29.6
2531 Female, age 67, both hemispheres 28.8
2528 Male, age 74, both hemispheres 28.1
2530 Female, age 94, left hemisphere 26.4
Entorhinal gyrus
nTPM: 28.8
2764 Male, age 80, right hemisphere 31.1
1938 Female, age 85, left hemisphere 30.6
2117 Female, age 91, right hemisphere 30.6
2686 Male, age 75, right hemisphere 28.0
1787 Male, age 76, left hemisphere 26.4
2613 Female, age 94, left hemisphere 26.0
Hippocampus, CA1
nTPM: 30.4
2749 Male, age 80, left hemisphere 38.0
2082 Female, age 91, right hemisphere 32.6
2045 Male, age 76, both hemispheres 29.7
1873 Female, age 85, both hemispheres 26.3
2527 Male, age 74, both hemispheres 25.7
Hippocampus, CA2
nTPM: 26.9
1940 Female, age 85, left hemisphere 29.9
1963 Male, age 80, left hemisphere 28.1
1892 Male, age 76, both hemispheres 27.7
2113 Female, age 91, right hemisphere 27.5
2249 Male, age 74, both hemispheres 25.4
2437 Female, age 94, left hemisphere 23.1
Hippocampus, CA3
nTPM: 30.7
2137 Male, age 80, left hemisphere 38.7
1867 Male, age 76, both hemispheres 31.2
1891 Female, age 85, both hemispheres 30.2
2620 Female, age 94, left hemisphere 29.3
2861 Female, age 67, both hemispheres 27.7
2436 Male, age 74, both hemispheres 27.1
Parahippocampal cortex
nTPM: 29.6
1850 Male, age 80, both hemispheres 33.5
2693 Female, age 94, both hemispheres 32.6
1933 Female, age 85, both hemispheres 32.5
2532 Female, age 72, left hemisphere 31.4
1990 Female, age 91, right hemisphere 29.3
2018 Male, age 76, both hemispheres 29.0
2692 Male, age 74, both hemispheres 28.8
2622 Female, age 67, right hemisphere 28.6
2250 Female, age 67, right hemisphere 26.7
2245 Female, age 91, both hemispheres 24.0
Perirhinal gyrus
nTPM: 32.0
2521 Female, age 94, right hemisphere 35.3
1841 Female, age 85, right hemisphere 31.7
2848 Male, age 76, right hemisphere 31.6
1794 Male, age 80, right hemisphere 31.4
1847 Female, age 91, left hemisphere 30.1
Subiculum
nTPM: 29.5
1901 Male, age 80, both hemispheres 34.8
2729 Female, age 91, right hemisphere 31.7
1977 Female, age 85, both hemispheres 29.3
2042 Male, age 76, both hemispheres 28.4
2438 Female, age 94, left hemisphere 27.8
2619 Male, age 74, both hemispheres 24.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 11.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 11.6
Samples: 197

Max nTPM: 19.2
Min nTPM: 6.3
Std nTPM: 2.2
Median nTPM: 11.5
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 19.2
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 17.2
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 17.1
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 17.1
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 16.8
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 16.2
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 16.2
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 15.8
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 15.6
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 15.6
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 15.5
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 43.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 43.0
FF:10169-103B7 60 years, female 52.9
FF:10153-102I9 76 years, female 33.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 40.0
Pig sample Sample description nTPM
Subiculum
nTPM: 31.1
Samples: 4

Max nTPM: 31.6
Min nTPM: 30.5
Sample A Female 30.5
Sample B Female 30.6
Sample C Male 31.6
Sample D Male 31.6
Dorsal hippocampus
nTPM: 40.0
Samples: 4

Max nTPM: 47.0
Min nTPM: 33.2
Sample A Female 37.7
Sample B Female 47.0
Sample C Male 33.2
Sample D Male 42.0
Entorhinal cortex
nTPM: 30.9
Samples: 4

Max nTPM: 33.2
Min nTPM: 28.1
Sample A Female 33.2
Sample B Female 28.1
Sample C Male 29.2
Sample D Male 33.0
Ventral hippocampus
nTPM: 38.3
Samples: 4

Max nTPM: 46.9
Min nTPM: 34.8
Sample A Female 35.8
Sample B Female 34.8
Sample C Male 35.7
Sample D Male 46.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 45.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 35.0
Samples: 4

Max nTPM: 37.3
Min nTPM: 32.4
Sample A Male 32.4
Sample B Male 37.3
Sample C Female 36.8
Sample D Female 33.4
Hippocampal formation
nTPM: 45.7
Samples: 4

Max nTPM: 49.0
Min nTPM: 39.9
Sample A Male 48.2
Sample B Male 45.7
Sample C Female 49.0
Sample D Female 39.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 11.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 11.5
69079998 Antisense, RP_050324_01_B10, Mouse strain C57BL/6J (56 days, male) 11.5

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org