HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:29.2 nTPM
HPA Brain:44.2 nTPM
GTEx:29.2 nTPM
FANTOM5:72.1 Scaled Tags Per Million
Pig:46.4 nTPM
Mouse:74.0 nTPM
Allen mouse:17.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA063133Antibody HPA067561Antibody CAB021114
Glial cells HighMediumLow
Neuronal cells MediumMediumNot detected






HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 44.2
Sample id Sample description nTPM
Hippocampus
nTPM: 44.2
1898 Male, age 80, left hemisphere 52.1
2529 Female, age 94, left hemisphere 49.6
1911 Female, age 85, right hemisphere 45.8
1855 Male, age 76, left hemisphere 45.7
2148 Female, age 91, left hemisphere 38.9
2621 Female, age 67, right hemisphere 33.2
Dentate gyrus
nTPM: 39.2
2010 Male, age 76, both hemispheres 46.6
2530 Female, age 94, left hemisphere 42.7
2246 Female, age 85, both hemispheres 41.2
2528 Male, age 74, both hemispheres 37.9
1927 Female, age 91, both hemispheres 36.0
2531 Female, age 67, both hemispheres 30.8
Entorhinal gyrus
nTPM: 38.7
2686 Male, age 75, right hemisphere 47.2
1938 Female, age 85, left hemisphere 45.5
2117 Female, age 91, right hemisphere 41.5
1787 Male, age 76, left hemisphere 39.5
2764 Male, age 80, right hemisphere 29.8
2613 Female, age 94, left hemisphere 29.0
Hippocampus, CA1
nTPM: 42.4
1873 Female, age 85, both hemispheres 49.4
2749 Male, age 80, left hemisphere 43.3
2527 Male, age 74, both hemispheres 43.1
2045 Male, age 76, both hemispheres 38.6
2082 Female, age 91, right hemisphere 37.4
Hippocampus, CA2
nTPM: 39.7
2113 Female, age 91, right hemisphere 43.0
2249 Male, age 74, both hemispheres 41.9
1892 Male, age 76, both hemispheres 41.2
2437 Female, age 94, left hemisphere 38.3
1940 Female, age 85, left hemisphere 37.9
1963 Male, age 80, left hemisphere 36.2
Hippocampus, CA3
nTPM: 35.6
2137 Male, age 80, left hemisphere 42.8
1891 Female, age 85, both hemispheres 42.1
1867 Male, age 76, both hemispheres 41.4
2436 Male, age 74, both hemispheres 31.6
2861 Female, age 67, both hemispheres 29.7
2620 Female, age 94, left hemisphere 26.0
Parahippocampal cortex
nTPM: 39.7
2250 Female, age 67, right hemisphere 48.5
2245 Female, age 91, both hemispheres 43.8
1933 Female, age 85, both hemispheres 42.9
2018 Male, age 76, both hemispheres 42.6
1850 Male, age 80, both hemispheres 40.6
2622 Female, age 67, right hemisphere 36.8
1990 Female, age 91, right hemisphere 36.4
2692 Male, age 74, both hemispheres 36.3
2532 Female, age 72, left hemisphere 34.7
2693 Female, age 94, both hemispheres 34.0
Perirhinal gyrus
nTPM: 38.2
1841 Female, age 85, right hemisphere 43.2
2848 Male, age 76, right hemisphere 38.1
1847 Female, age 91, left hemisphere 37.8
2521 Female, age 94, right hemisphere 35.9
1794 Male, age 80, right hemisphere 35.8
Subiculum
nTPM: 40.6
2438 Female, age 94, left hemisphere 47.1
2729 Female, age 91, right hemisphere 44.1
2042 Male, age 76, both hemispheres 41.8
1901 Male, age 80, both hemispheres 38.6
1977 Female, age 85, both hemispheres 38.3
2619 Male, age 74, both hemispheres 33.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 29.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 29.2
Samples: 197

Max nTPM: 56.4
Min nTPM: 14.8
Std nTPM: 7.3
Median nTPM: 28.2
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 56.4
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 55.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 53.1
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 49.8
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 49.2
GTEX-13FHO-0011-R1b-SM-5KLZG 60-69 years, male 47.3
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 47.2
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 47.0
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 44.1
GTEX-1A3MX-0011-R1b-SM-7P8PH 60-69 years, male 43.8
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 43.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 72.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 72.1
FF:10153-102I9 76 years, female 77.9
FF:10169-103B7 60 years, female 66.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 46.4
Pig sample Sample description nTPM
Subiculum
nTPM: 43.9
Samples: 4

Max nTPM: 48.8
Min nTPM: 40.2
Sample A Female 48.8
Sample B Female 42.2
Sample C Male 40.2
Sample D Male 44.2
Dorsal hippocampus
nTPM: 46.4
Samples: 4

Max nTPM: 54.0
Min nTPM: 38.4
Sample A Female 54.0
Sample B Female 46.8
Sample C Male 46.4
Sample D Male 38.4
Entorhinal cortex
nTPM: 36.9
Samples: 4

Max nTPM: 41.9
Min nTPM: 31.1
Sample A Female 33.1
Sample B Female 41.9
Sample C Male 41.5
Sample D Male 31.1
Ventral hippocampus
nTPM: 42.1
Samples: 4

Max nTPM: 45.4
Min nTPM: 35.9
Sample A Female 45.4
Sample B Female 44.8
Sample C Male 35.9
Sample D Male 42.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 74.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 73.7
Samples: 4

Max nTPM: 79.1
Min nTPM: 68.9
Sample A Male 79.1
Sample B Male 75.0
Sample C Female 68.9
Sample D Female 71.8
Hippocampal formation
nTPM: 74.0
Samples: 4

Max nTPM: 76.1
Min nTPM: 71.5
Sample A Male 74.5
Sample B Male 73.8
Sample C Female 76.1
Sample D Female 71.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 17.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 17.9
71610840 Antisense, RP_050927_01_H10, Mouse strain C57BL/6J (56 days, male) 17.9

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