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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
174.6
nTPM
FANTOM5:
102.3
Scaled Tags Per Million
Pig:
114.0
nTPM
Allen mouse:
2.5
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
174.6
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 174.6
2301
Female, age 85, both hemispheres
207.4
2090
Male, age 80, both hemispheres
193.9
2188
Female, age 91, both hemispheres
176.6
1984
Male, age 76, both hemispheres
120.6
Dorsal cochlear nucleus nTPM: 159.0
2378
Male, age 80, both hemispheres
181.5
2187
Female, age 91, both hemispheres
177.2
2370
Male, age 61, both hemispheres
156.6
2802
Male, age 74, right hemisphere
141.9
2058
Male, age 76, both hemispheres
137.6
Dorsal tegmental nucleus nTPM: 142.1
2083
Male, age 80, both hemispheres
162.1
2326
Male, age 74, both hemispheres
148.7
2358
Male, age 61, both hemispheres
140.8
1936
Male, age 76, left hemisphere
116.6
Dorsolateral tegmental area nTPM: 159.9
2337
Male, age 61, both hemispheres
209.1
2751
Female, age 85, both hemispheres
208.6
2654
Male, age 80, both hemispheres
171.1
2360
Male, age 74, both hemispheres
121.4
2141
Male, age 76, both hemispheres
89.6
Kolliker-Fuse nucleus nTPM: 157.9
2793
Female, age 91, left hemisphere
185.4
2315
Male, age 76, right hemisphere
157.0
2163
Male, age 80, both hemispheres
131.3
Lateral lemniscal nuclei nTPM: 143.1
2036
Male, age 80, both hemispheres
179.1
2320
Female, age 91, left hemisphere
154.5
2746
Female, age 85, left hemisphere
138.7
2453
Male, age 74, right hemisphere
124.6
2169
Male, age 76, both hemispheres
118.3
Lateral parabrachial nucleus nTPM: 171.6
2792
Male, age 76, both hemispheres
242.9
2013
Male, age 80, both hemispheres
168.9
2790
Male, age 61, both hemispheres
156.9
2139
Female, age 85, right hemisphere
117.6
Lateral vestibular nucleus nTPM: 144.6
2311
Male, age 80, both hemispheres
173.6
2184
Male, age 76, both hemispheres
115.7
Locus coeruleus nTPM: 89.0
2162
Male, age 80, both hemispheres
106.3
2317
Female, age 72, unknown
99.5
2720
Male, age 74, both hemispheres
99.2
2123
Female, age 91, both hemispheres
82.8
2788
Male, age 74, unknown
81.3
2014
Male, age 55, unknown
80.5
1980
Male, age 76, both hemispheres
73.1
Medial parabrachial nucleus nTPM: 164.5
2170
Female, age 91, both hemispheres
211.0
2854
Male, age 80, both hemispheres
178.2
2463
Female, age 85, right hemisphere
174.0
2156
Male, age 61, both hemispheres
130.5
2786
Male, age 76, both hemispheres
128.7
Medial periolivary nuclei nTPM: 139.1
2081
Male, age 80, both hemispheres
180.3
2791
Male, age 74, right hemisphere
164.8
2458
Female, age 91, both hemispheres
134.6
2063
Male, age 76, both hemispheres
127.5
2171
Female, age 85, both hemispheres
88.2
Motor facial nucleus nTPM: 141.3
2126
Male, age 61, both hemispheres
194.3
2365
Male, age 74, right hemisphere
168.2
2697
Female, age 85, both hemispheres
142.0
2795
Female, age 91, both hemispheres
129.6
2327
Male, age 80, both hemispheres
108.3
2062
Male, age 76, both hemispheres
105.1
Motor trigeminal nucleus nTPM: 134.4
2560
Male, age 74, both hemispheres
162.0
2321
Female, age 91, both hemispheres
149.6
2079
Male, age 80, both hemispheres
122.2
2309
Male, age 76, both hemispheres
120.7
2335
Male, age 61, both hemispheres
117.3
Nuclei of the trapezoid body nTPM: 121.3
2166
Male, age 80, both hemispheres
149.2
2368
Female, age 91, both hemispheres
144.9
2159
Male, age 61, both hemispheres
116.0
1983
Male, age 76, both hemispheres
113.0
2735
Female, age 85, both hemispheres
83.7
Nucleus raphe magnus nTPM: 120.4
2051
Male, age 76, both hemispheres
168.1
2459
Female, age 91, both hemispheres
154.7
2328
Male, age 80, both hemispheres
129.7
2455
Male, age 74, both hemispheres
119.1
2160
Male, age 61, both hemispheres
82.0
2172
Female, age 85, both hemispheres
68.4
Paramedian reticular nucleus nTPM: 153.5
2052
Male, age 76, both hemispheres
187.5
2057
Male, age 80, both hemispheres
161.9
2050
Female, age 85, both hemispheres
139.1
2313
Male, age 61, both hemispheres
125.4
Pedunculopontine tegmental nucleus nTPM: 137.9
2338
Male, age 61, both hemispheres
162.8
2334
Male, age 80, both hemispheres
141.1
1921
Female, age 85, both hemispheres
109.9
Pontine nuclei nTPM: 150.3
2454
Male, age 74, left hemisphere
207.8
2319
Female, age 91, both hemispheres
181.9
2109
Female, age 72, unknown
181.1
2115
Male, age 80, left hemisphere
151.7
1863
Male, age 55, unknown
144.0
1968
Male, age 76, left hemisphere
128.1
2727
Male, age 61, right hemisphere
114.9
2787
Female, age 85, both hemispheres
92.8
Pontine raphe nucleus nTPM: 102.6
2853
Male, age 76, midline
106.0
2122
Female, age 85, midline
99.2
Posteroventral cochlear nucleus nTPM: 173.2
2341
Male, age 80, both hemispheres
230.2
2135
Female, age 91, both hemispheres
198.7
2070
Male, age 76, both hemispheres
168.2
2371
Male, age 61, both hemispheres
163.4
2752
Female, age 85, both hemispheres
105.7
Principal sensory trigeminal nucleus nTPM: 127.4
2367
Female, age 91, left hemisphere
174.9
2008
Male, age 80, left hemisphere
120.6
2324
Male, age 76, both hemispheres
115.2
2158
Male, age 61, both hemispheres
98.8
Reticular pontine nucleus, caudal nTPM: 150.2
2559
Male, age 74, both hemispheres
179.1
2457
Female, age 91, both hemispheres
158.1
2092
Male, age 76, both hemispheres
155.9
2332
Male, age 80, right hemisphere
107.8
Reticular pontine nucleus, oral nTPM: 170.0
2361
Male, age 74, both hemispheres
206.4
1939
Male, age 80, both hemispheres
174.4
2366
Female, age 91, both hemispheres
164.2
2012
Female, age 85, both hemispheres
159.2
2167
Male, age 76, both hemispheres
145.8
Reticulotegmental nucleus nTPM: 127.3
2322
Female, age 91, both hemispheres
147.9
2452
Male, age 74, both hemispheres
140.5
2333
Male, age 80, both hemispheres
135.0
2325
Male, age 76, both hemispheres
86.0
Spinal trigeminal nucleus, oral nTPM: 123.3
2164
Male, age 80, both hemispheres
140.9
1978
Male, age 76, both hemispheres
129.5
2737
Female, age 85, both hemispheres
99.4
Subcoeruleus area nTPM: 146.6
2369
Female, age 85, left hemisphere
243.1
1958
Male, age 80, both hemispheres
147.7
2089
Male, age 76, left hemisphere
122.1
2451
Male, age 74, both hemispheres
119.7
2323
Female, age 91, left hemisphere
100.1
Superior olive nTPM: 152.1
2364
Male, age 74, right hemisphere
180.2
2020
Male, age 76, both hemispheres
178.4
2329
Male, age 80, right hemisphere
147.7
2561
Female, age 91, both hemispheres
129.0
1875
Female, age 85, both hemispheres
125.4
Ventral periolivary nuclei nTPM: 137.2
2023
Male, age 76, both hemispheres
206.6
2165
Male, age 80, both hemispheres
125.4
2794
Female, age 91, left hemisphere
111.4
2130
Female, age 85, both hemispheres
105.6
Ventrolateral tegmental area, A5 NE cell group nTPM: 148.4
2456
Female, age 91, both hemispheres
170.4
2359
Male, age 61, both hemispheres
157.3
2840
Female, age 85, both hemispheres
149.0
2161
Male, age 80, both hemispheres
143.1
1959
Male, age 76, both hemispheres
141.9
2449
Male, age 74, both hemispheres
129.0
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
114.0
Pig sample
Sample description
nTPM
Pons nTPM: 114.0
Samples: 4
Max nTPM: 162.0
Min nTPM: 92.2
Sample A
Female
96.0
Sample B
Female
92.2
Sample C
Male
105.8
Sample D
Male
162.0
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
