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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
93.8
nTPM
Monaco:
211.9
nTPM
Schmiedel:
61.0
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
93.8
HPA sample
nTPM
gdT-cell nTPM: 77.1
Samples: 6
Max nTPM: 104.6
Min nTPM: 51.8
P10809_1007
51.8
P10809_1022
104.6
P10809_1041
80.2
P10809_1060
65.1
P10809_1077
94.3
P10809_1098
66.4
MAIT T-cell nTPM: 93.9
Samples: 6
Max nTPM: 122.0
Min nTPM: 61.1
P10809_1006
61.1
P10809_1024
122.0
P10809_1043
103.4
P10809_1062
91.0
P10809_1083
84.4
P10809_1097
101.2
Memory CD4 T-cell nTPM: 70.5
Samples: 6
Max nTPM: 86.6
Min nTPM: 59.1
P10809_1014
59.1
P10809_1026
65.1
P10809_1045
86.6
P10809_1064
60.0
P10809_1086
77.7
P10809_1113
74.6
Memory CD8 T-cell nTPM: 78.8
Samples: 5
Max nTPM: 97.9
Min nTPM: 67.6
P10809_1012
67.6
P10809_1027
85.8
P10809_1046
97.9
P10809_1065
69.8
P10809_1111
73.0
Naive CD4 T-cell nTPM: 60.8
Samples: 6
Max nTPM: 65.9
Min nTPM: 52.1
P10809_1015
52.1
P10809_1030
62.6
P10809_1049
65.3
P10809_1068
58.2
P10809_1085
60.9
P10809_1112
65.9
Naive CD8 T-cell nTPM: 60.3
Samples: 6
Max nTPM: 81.3
Min nTPM: 45.4
P10809_1016
45.4
P10809_1031
60.4
P10809_1050
50.5
P10809_1069
71.0
P10809_1087
81.3
P10809_1110
53.3
T-reg nTPM: 87.0
Samples: 6
Max nTPM: 106.2
Min nTPM: 52.2
P10809_1018
74.7
P10809_1037
98.5
P10809_1056
52.2
P10809_1075
106.2
P10809_1094
91.9
P10809_1106
98.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
211.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 142.2
Samples: 4
Max nTPM: 179.8
Min nTPM: 96.8
RHH5202_R3573
176.4
RHH5230_R3602
179.8
RHH5259_R3631
115.7
RHH5288_R3660
96.8
Effector memory CD8 T-cell nTPM: 211.0
Samples: 4
Max nTPM: 237.2
Min nTPM: 186.0
RHH5203_R3574
186.0
RHH5231_R3603
216.4
RHH5260_R3632
204.3
RHH5289_R3661
237.2
MAIT T-cell nTPM: 183.7
Samples: 4
Max nTPM: 264.5
Min nTPM: 150.0
RHH5233_R3605
168.2
RHH5205_R3576
264.5
RHH5262_R3634
152.2
RHH5297_R3663
150.0
Memory CD4 T-cell TFH nTPM: 154.1
Samples: 4
Max nTPM: 190.5
Min nTPM: 107.2
RHH5300_R3666
107.2
RHH5236_R3608
173.6
RHH5265_R3637
145.0
RHH5208_R3579
190.5
Memory CD4 T-cell Th1 nTPM: 137.2
Samples: 4
Max nTPM: 152.6
Min nTPM: 120.6
RHH5210_R3581
137.1
RHH5302_R3668
138.6
RHH5238_R3610
120.6
RHH5267_R3639
152.6
Memory CD4 T-cell Th1/Th17 nTPM: 144.1
Samples: 4
Max nTPM: 158.3
Min nTPM: 131.5
RHH5303_R3669
158.3
RHH5211_R3582
154.9
RHH5239_R3611
131.5
RHH5268_R3640
131.7
Memory CD4 T-cell Th17 nTPM: 162.4
Samples: 4
Max nTPM: 170.3
Min nTPM: 156.0
RHH5304_R3670
156.0
RHH5212_R3583
170.3
RHH5240_R3612
167.3
RHH5269_R3641
156.1
Memory CD4 T-cell Th2 nTPM: 139.6
Samples: 4
Max nTPM: 156.0
Min nTPM: 95.0
RHH5305_R3671
95.0
RHH5213_R3584
156.0
RHH5241_R3613
151.9
RHH5270_R3642
155.5
Naive CD4 T-cell nTPM: 105.6
Samples: 4
Max nTPM: 118.5
Min nTPM: 95.7
RHH5306_R3672
105.7
RHH5214_R3585
118.5
RHH5242_R3614
95.7
RHH5271_R3643
102.6
Naive CD8 T-cell nTPM: 100.4
Samples: 4
Max nTPM: 117.1
Min nTPM: 85.3
RHH5201_R3572
117.1
RHH5229_R3601
97.0
RHH5258_R3630
85.3
RHH5287_R3659
102.0
Non-Vd2 gdTCR nTPM: 211.8
Samples: 4
Max nTPM: 260.2
Min nTPM: 156.9
RHH5235_R3607
260.2
RHH5264_R3636
206.8
RHH5207_R3578
223.2
RHH5299_R3665
156.9
T-reg nTPM: 139.4
Samples: 4
Max nTPM: 193.7
Min nTPM: 117.7
RHH5301_R3667
120.8
RHH5237_R3609
193.7
RHH5266_R3638
117.7
RHH5209_R3580
125.2
Terminal effector memory CD4 T-cell nTPM: 211.9
Samples: 2
Max nTPM: 257.8
Min nTPM: 166.0
RHH5243_R3615
257.8
RHH5272_R3644
166.0
Terminal effector memory CD8 T-cell nTPM: 198.1
Samples: 4
Max nTPM: 253.6
Min nTPM: 155.9
RHH5232_R3604
253.6
RHH5204_R3575
159.9
RHH5261_R3633
223.1
RHH5296_R3662
155.9
Vd2 gdTCR nTPM: 169.4
Samples: 4
Max nTPM: 203.6
Min nTPM: 116.5
RHH5234_R3606
174.5
RHH5206_R3577
203.6
RHH5263_R3635
183.0
RHH5298_R3664
116.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
