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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
58.4
nTPM
Monaco:
121.8
nTPM
Schmiedel:
142.8
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
58.4
HPA sample
nTPM
gdT-cell nTPM: 55.7
Samples: 6
Max nTPM: 66.6
Min nTPM: 33.9
P10809_1007
33.9
P10809_1022
66.6
P10809_1041
65.1
P10809_1060
51.1
P10809_1077
66.5
P10809_1098
51.2
MAIT T-cell nTPM: 52.3
Samples: 6
Max nTPM: 69.5
Min nTPM: 31.5
P10809_1006
31.5
P10809_1024
56.8
P10809_1043
53.0
P10809_1062
46.1
P10809_1083
69.5
P10809_1097
56.9
Memory CD4 T-cell nTPM: 46.4
Samples: 6
Max nTPM: 65.1
Min nTPM: 29.3
P10809_1014
29.3
P10809_1026
35.3
P10809_1045
44.6
P10809_1064
49.6
P10809_1086
65.1
P10809_1113
54.4
Memory CD8 T-cell nTPM: 57.5
Samples: 5
Max nTPM: 80.0
Min nTPM: 30.8
P10809_1012
30.8
P10809_1027
73.9
P10809_1046
42.4
P10809_1065
80.0
P10809_1111
60.3
Naive CD4 T-cell nTPM: 37.7
Samples: 6
Max nTPM: 63.9
Min nTPM: 23.2
P10809_1015
23.2
P10809_1030
30.1
P10809_1049
23.4
P10809_1068
41.4
P10809_1085
63.9
P10809_1112
44.4
Naive CD8 T-cell nTPM: 56.0
Samples: 6
Max nTPM: 77.9
Min nTPM: 31.3
P10809_1016
31.3
P10809_1031
56.9
P10809_1050
53.9
P10809_1069
63.8
P10809_1087
77.9
P10809_1110
52.4
T-reg nTPM: 58.4
Samples: 6
Max nTPM: 86.3
Min nTPM: 35.6
P10809_1018
37.1
P10809_1037
76.3
P10809_1056
35.6
P10809_1075
44.6
P10809_1094
86.3
P10809_1106
70.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
121.8
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 103.7
Samples: 4
Max nTPM: 127.9
Min nTPM: 74.8
RHH5202_R3573
127.9
RHH5230_R3602
105.4
RHH5259_R3631
74.8
RHH5288_R3660
106.7
Effector memory CD8 T-cell nTPM: 114.3
Samples: 4
Max nTPM: 141.0
Min nTPM: 67.6
RHH5203_R3574
138.8
RHH5231_R3603
141.0
RHH5260_R3632
67.6
RHH5289_R3661
109.6
MAIT T-cell nTPM: 101.2
Samples: 4
Max nTPM: 111.3
Min nTPM: 92.0
RHH5233_R3605
111.3
RHH5205_R3576
92.0
RHH5262_R3634
93.1
RHH5297_R3663
108.2
Memory CD4 T-cell TFH nTPM: 119.6
Samples: 4
Max nTPM: 155.5
Min nTPM: 94.2
RHH5300_R3666
94.2
RHH5236_R3608
132.1
RHH5265_R3637
96.5
RHH5208_R3579
155.5
Memory CD4 T-cell Th1 nTPM: 91.8
Samples: 4
Max nTPM: 103.5
Min nTPM: 66.3
RHH5210_R3581
103.5
RHH5302_R3668
103.2
RHH5238_R3610
94.1
RHH5267_R3639
66.3
Memory CD4 T-cell Th1/Th17 nTPM: 96.0
Samples: 4
Max nTPM: 119.5
Min nTPM: 64.8
RHH5303_R3669
119.5
RHH5211_R3582
107.0
RHH5239_R3611
92.8
RHH5268_R3640
64.8
Memory CD4 T-cell Th17 nTPM: 87.5
Samples: 4
Max nTPM: 105.9
Min nTPM: 59.8
RHH5304_R3670
91.2
RHH5212_R3583
105.9
RHH5240_R3612
93.0
RHH5269_R3641
59.8
Memory CD4 T-cell Th2 nTPM: 97.3
Samples: 4
Max nTPM: 125.0
Min nTPM: 78.3
RHH5305_R3671
88.6
RHH5213_R3584
97.4
RHH5241_R3613
125.0
RHH5270_R3642
78.3
Naive CD4 T-cell nTPM: 87.6
Samples: 4
Max nTPM: 109.6
Min nTPM: 68.1
RHH5306_R3672
68.4
RHH5214_R3585
109.6
RHH5242_R3614
104.3
RHH5271_R3643
68.1
Naive CD8 T-cell nTPM: 93.6
Samples: 4
Max nTPM: 117.3
Min nTPM: 66.8
RHH5201_R3572
117.3
RHH5229_R3601
66.8
RHH5258_R3630
91.7
RHH5287_R3659
98.4
Non-Vd2 gdTCR nTPM: 121.8
Samples: 4
Max nTPM: 139.4
Min nTPM: 112.3
RHH5235_R3607
114.1
RHH5264_R3636
112.3
RHH5207_R3578
139.4
RHH5299_R3665
121.4
T-reg nTPM: 98.3
Samples: 4
Max nTPM: 142.6
Min nTPM: 57.1
RHH5301_R3667
87.1
RHH5237_R3609
142.6
RHH5266_R3638
57.1
RHH5209_R3580
106.5
Terminal effector memory CD4 T-cell nTPM: 91.4
Samples: 2
Max nTPM: 112.0
Min nTPM: 70.8
RHH5243_R3615
70.8
RHH5272_R3644
112.0
Terminal effector memory CD8 T-cell nTPM: 113.0
Samples: 4
Max nTPM: 147.8
Min nTPM: 77.6
RHH5232_R3604
110.2
RHH5204_R3575
147.8
RHH5261_R3633
77.6
RHH5296_R3662
116.5
Vd2 gdTCR nTPM: 118.5
Samples: 4
Max nTPM: 139.5
Min nTPM: 92.9
RHH5234_R3606
117.8
RHH5206_R3577
139.5
RHH5263_R3635
92.9
RHH5298_R3664
123.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
