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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
122.3
nTPM
Monaco:
120.2
nTPM
Schmiedel:
110.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
122.3
HPA sample
nTPM
gdT-cell nTPM: 82.2
Samples: 6
Max nTPM: 107.9
Min nTPM: 66.9
P10809_1007
77.9
P10809_1022
107.9
P10809_1041
91.2
P10809_1060
74.9
P10809_1077
66.9
P10809_1098
74.2
MAIT T-cell nTPM: 94.9
Samples: 6
Max nTPM: 111.9
Min nTPM: 71.2
P10809_1006
87.4
P10809_1024
111.9
P10809_1043
95.1
P10809_1062
102.1
P10809_1083
71.2
P10809_1097
101.4
Memory CD4 T-cell nTPM: 94.7
Samples: 6
Max nTPM: 109.3
Min nTPM: 82.5
P10809_1014
84.9
P10809_1026
109.3
P10809_1045
97.6
P10809_1064
94.4
P10809_1086
82.5
P10809_1113
99.6
Memory CD8 T-cell nTPM: 96.3
Samples: 5
Max nTPM: 108.2
Min nTPM: 90.2
P10809_1012
90.2
P10809_1027
108.2
P10809_1046
92.9
P10809_1065
92.4
P10809_1111
97.9
Naive CD4 T-cell nTPM: 89.4
Samples: 6
Max nTPM: 99.2
Min nTPM: 80.5
P10809_1015
86.9
P10809_1030
97.7
P10809_1049
99.2
P10809_1068
80.5
P10809_1085
81.5
P10809_1112
90.4
Naive CD8 T-cell nTPM: 85.1
Samples: 6
Max nTPM: 94.1
Min nTPM: 72.6
P10809_1016
89.2
P10809_1031
94.1
P10809_1050
72.6
P10809_1069
86.3
P10809_1087
78.5
P10809_1110
89.6
T-reg nTPM: 122.3
Samples: 6
Max nTPM: 158.1
Min nTPM: 100.9
P10809_1018
110.2
P10809_1037
158.1
P10809_1056
103.5
P10809_1075
100.9
P10809_1094
135.6
P10809_1106
125.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
120.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 80.3
Samples: 4
Max nTPM: 108.9
Min nTPM: 52.4
RHH5202_R3573
81.4
RHH5230_R3602
78.3
RHH5259_R3631
52.4
RHH5288_R3660
108.9
Effector memory CD8 T-cell nTPM: 95.8
Samples: 4
Max nTPM: 122.2
Min nTPM: 64.2
RHH5203_R3574
122.2
RHH5231_R3603
101.9
RHH5260_R3632
64.2
RHH5289_R3661
95.0
MAIT T-cell nTPM: 93.9
Samples: 4
Max nTPM: 121.7
Min nTPM: 66.9
RHH5233_R3605
94.5
RHH5205_R3576
66.9
RHH5262_R3634
92.6
RHH5297_R3663
121.7
Memory CD4 T-cell TFH nTPM: 120.3
Samples: 4
Max nTPM: 146.3
Min nTPM: 99.0
RHH5300_R3666
99.0
RHH5236_R3608
146.3
RHH5265_R3637
112.4
RHH5208_R3579
123.3
Memory CD4 T-cell Th1 nTPM: 91.8
Samples: 4
Max nTPM: 123.7
Min nTPM: 65.4
RHH5210_R3581
111.9
RHH5302_R3668
123.7
RHH5238_R3610
66.1
RHH5267_R3639
65.4
Memory CD4 T-cell Th1/Th17 nTPM: 107.6
Samples: 4
Max nTPM: 164.3
Min nTPM: 40.2
RHH5303_R3669
161.2
RHH5211_R3582
164.3
RHH5239_R3611
40.2
RHH5268_R3640
64.6
Memory CD4 T-cell Th17 nTPM: 78.5
Samples: 4
Max nTPM: 97.1
Min nTPM: 62.8
RHH5304_R3670
72.6
RHH5212_R3583
97.1
RHH5240_R3612
81.5
RHH5269_R3641
62.8
Memory CD4 T-cell Th2 nTPM: 114.3
Samples: 4
Max nTPM: 141.1
Min nTPM: 88.9
RHH5305_R3671
88.9
RHH5213_R3584
134.0
RHH5241_R3613
141.1
RHH5270_R3642
93.0
Naive CD4 T-cell nTPM: 84.6
Samples: 4
Max nTPM: 110.4
Min nTPM: 63.1
RHH5306_R3672
87.4
RHH5214_R3585
110.4
RHH5242_R3614
77.4
RHH5271_R3643
63.1
Naive CD8 T-cell nTPM: 78.4
Samples: 4
Max nTPM: 131.6
Min nTPM: 37.1
RHH5201_R3572
131.6
RHH5229_R3601
37.1
RHH5258_R3630
82.2
RHH5287_R3659
62.5
Non-Vd2 gdTCR nTPM: 101.4
Samples: 4
Max nTPM: 116.8
Min nTPM: 62.0
RHH5235_R3607
62.0
RHH5264_R3636
116.8
RHH5207_R3578
110.1
RHH5299_R3665
116.5
T-reg nTPM: 104.0
Samples: 4
Max nTPM: 141.1
Min nTPM: 71.6
RHH5301_R3667
110.2
RHH5237_R3609
141.1
RHH5266_R3638
71.6
RHH5209_R3580
93.2
Terminal effector memory CD4 T-cell nTPM: 91.4
Samples: 2
Max nTPM: 120.6
Min nTPM: 62.2
RHH5243_R3615
62.2
RHH5272_R3644
120.6
Terminal effector memory CD8 T-cell nTPM: 106.5
Samples: 4
Max nTPM: 126.1
Min nTPM: 64.7
RHH5232_R3604
126.1
RHH5204_R3575
124.0
RHH5261_R3633
64.7
RHH5296_R3662
111.3
Vd2 gdTCR nTPM: 103.5
Samples: 4
Max nTPM: 137.9
Min nTPM: 71.3
RHH5234_R3606
91.5
RHH5206_R3577
137.9
RHH5263_R3635
71.3
RHH5298_R3664
113.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
