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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
136.7
nTPM
Monaco:
51.3
nTPM
Schmiedel:
52.0
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
136.7
HPA sample
nTPM
gdT-cell nTPM: 87.1
Samples: 6
Max nTPM: 101.5
Min nTPM: 58.1
P10809_1007
58.1
P10809_1022
101.5
P10809_1041
94.1
P10809_1060
94.1
P10809_1077
89.5
P10809_1098
85.1
MAIT T-cell nTPM: 100.7
Samples: 6
Max nTPM: 149.5
Min nTPM: 51.7
P10809_1006
51.7
P10809_1024
149.5
P10809_1043
107.9
P10809_1062
97.9
P10809_1083
86.6
P10809_1097
110.8
Memory CD4 T-cell nTPM: 88.5
Samples: 6
Max nTPM: 102.2
Min nTPM: 63.5
P10809_1014
63.5
P10809_1026
90.9
P10809_1045
98.7
P10809_1064
81.8
P10809_1086
102.2
P10809_1113
93.9
Memory CD8 T-cell nTPM: 89.0
Samples: 5
Max nTPM: 103.6
Min nTPM: 60.6
P10809_1012
60.6
P10809_1027
102.6
P10809_1046
103.6
P10809_1065
88.7
P10809_1111
89.3
Naive CD4 T-cell nTPM: 97.2
Samples: 6
Max nTPM: 126.6
Min nTPM: 59.6
P10809_1015
59.6
P10809_1030
126.6
P10809_1049
120.0
P10809_1068
92.3
P10809_1085
96.5
P10809_1112
88.2
Naive CD8 T-cell nTPM: 88.1
Samples: 6
Max nTPM: 107.8
Min nTPM: 68.2
P10809_1016
72.0
P10809_1031
68.2
P10809_1050
86.8
P10809_1069
107.8
P10809_1087
97.5
P10809_1110
96.2
T-reg nTPM: 136.7
Samples: 6
Max nTPM: 176.4
Min nTPM: 74.9
P10809_1018
74.9
P10809_1037
140.8
P10809_1056
176.4
P10809_1075
136.7
P10809_1094
142.9
P10809_1106
148.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
51.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 35.3
Samples: 4
Max nTPM: 71.2
Min nTPM: 15.7
RHH5202_R3573
29.2
RHH5230_R3602
15.7
RHH5259_R3631
25.1
RHH5288_R3660
71.2
Effector memory CD8 T-cell nTPM: 33.1
Samples: 4
Max nTPM: 39.9
Min nTPM: 23.9
RHH5203_R3574
39.9
RHH5231_R3603
30.4
RHH5260_R3632
23.9
RHH5289_R3661
38.0
MAIT T-cell nTPM: 38.6
Samples: 4
Max nTPM: 52.6
Min nTPM: 30.4
RHH5233_R3605
40.4
RHH5205_R3576
30.4
RHH5262_R3634
30.9
RHH5297_R3663
52.6
Memory CD4 T-cell TFH nTPM: 48.1
Samples: 4
Max nTPM: 63.3
Min nTPM: 33.1
RHH5300_R3666
57.4
RHH5236_R3608
63.3
RHH5265_R3637
33.1
RHH5208_R3579
38.7
Memory CD4 T-cell Th1 nTPM: 45.6
Samples: 4
Max nTPM: 71.2
Min nTPM: 29.1
RHH5210_R3581
47.3
RHH5302_R3668
71.2
RHH5238_R3610
34.9
RHH5267_R3639
29.1
Memory CD4 T-cell Th1/Th17 nTPM: 36.8
Samples: 4
Max nTPM: 63.1
Min nTPM: 17.5
RHH5303_R3669
63.1
RHH5211_R3582
41.2
RHH5239_R3611
17.5
RHH5268_R3640
25.2
Memory CD4 T-cell Th17 nTPM: 37.0
Samples: 4
Max nTPM: 62.2
Min nTPM: 22.4
RHH5304_R3670
40.1
RHH5212_R3583
62.2
RHH5240_R3612
23.1
RHH5269_R3641
22.4
Memory CD4 T-cell Th2 nTPM: 38.7
Samples: 4
Max nTPM: 57.8
Min nTPM: 25.1
RHH5305_R3671
44.7
RHH5213_R3584
27.2
RHH5241_R3613
57.8
RHH5270_R3642
25.1
Naive CD4 T-cell nTPM: 36.3
Samples: 4
Max nTPM: 42.2
Min nTPM: 30.9
RHH5306_R3672
42.2
RHH5214_R3585
37.5
RHH5242_R3614
30.9
RHH5271_R3643
34.6
Naive CD8 T-cell nTPM: 34.6
Samples: 4
Max nTPM: 58.4
Min nTPM: 15.7
RHH5201_R3572
31.9
RHH5229_R3601
15.7
RHH5258_R3630
58.4
RHH5287_R3659
32.5
Non-Vd2 gdTCR nTPM: 37.4
Samples: 4
Max nTPM: 57.1
Min nTPM: 12.6
RHH5235_R3607
12.6
RHH5264_R3636
57.1
RHH5207_R3578
31.8
RHH5299_R3665
48.0
T-reg nTPM: 40.9
Samples: 4
Max nTPM: 52.7
Min nTPM: 29.0
RHH5301_R3667
49.1
RHH5237_R3609
52.7
RHH5266_R3638
29.0
RHH5209_R3580
32.6
Terminal effector memory CD4 T-cell nTPM: 36.5
Samples: 2
Max nTPM: 49.4
Min nTPM: 23.6
RHH5243_R3615
23.6
RHH5272_R3644
49.4
Terminal effector memory CD8 T-cell nTPM: 51.3
Samples: 4
Max nTPM: 82.7
Min nTPM: 28.3
RHH5232_R3604
36.7
RHH5204_R3575
82.7
RHH5261_R3633
28.3
RHH5296_R3662
57.5
Vd2 gdTCR nTPM: 42.5
Samples: 4
Max nTPM: 55.2
Min nTPM: 28.0
RHH5234_R3606
32.6
RHH5206_R3577
54.1
RHH5263_R3635
28.0
RHH5298_R3664
55.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
