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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
175.3
nTPM
Monaco:
120.4
nTPM
Schmiedel:
321.5
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
175.3
HPA sample
nTPM
gdT-cell nTPM: 104.7
Samples: 6
Max nTPM: 138.1
Min nTPM: 79.6
P10809_1007
79.6
P10809_1022
119.5
P10809_1041
138.1
P10809_1060
84.3
P10809_1077
104.2
P10809_1098
102.7
MAIT T-cell nTPM: 124.0
Samples: 6
Max nTPM: 182.8
Min nTPM: 88.4
P10809_1006
88.4
P10809_1024
182.8
P10809_1043
126.3
P10809_1062
112.4
P10809_1083
93.4
P10809_1097
140.7
Memory CD4 T-cell nTPM: 133.0
Samples: 6
Max nTPM: 168.2
Min nTPM: 113.4
P10809_1014
113.4
P10809_1026
137.0
P10809_1045
168.2
P10809_1064
114.4
P10809_1086
125.1
P10809_1113
140.1
Memory CD8 T-cell nTPM: 120.9
Samples: 5
Max nTPM: 151.2
Min nTPM: 87.5
P10809_1012
87.5
P10809_1027
127.7
P10809_1046
151.2
P10809_1065
126.8
P10809_1111
111.1
Naive CD4 T-cell nTPM: 154.6
Samples: 6
Max nTPM: 200.1
Min nTPM: 89.2
P10809_1015
89.2
P10809_1030
200.1
P10809_1049
191.0
P10809_1068
146.8
P10809_1085
146.4
P10809_1112
154.2
Naive CD8 T-cell nTPM: 127.2
Samples: 6
Max nTPM: 157.1
Min nTPM: 103.7
P10809_1016
103.7
P10809_1031
157.1
P10809_1050
132.1
P10809_1069
127.4
P10809_1087
110.7
P10809_1110
132.4
T-reg nTPM: 175.3
Samples: 6
Max nTPM: 198.3
Min nTPM: 132.1
P10809_1018
132.1
P10809_1037
181.3
P10809_1056
177.0
P10809_1075
189.7
P10809_1094
198.3
P10809_1106
173.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
120.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 92.5
Samples: 4
Max nTPM: 151.7
Min nTPM: 52.0
RHH5202_R3573
101.4
RHH5230_R3602
52.0
RHH5259_R3631
64.7
RHH5288_R3660
151.7
Effector memory CD8 T-cell nTPM: 84.1
Samples: 4
Max nTPM: 106.9
Min nTPM: 59.5
RHH5203_R3574
106.9
RHH5231_R3603
102.1
RHH5260_R3632
59.5
RHH5289_R3661
67.7
MAIT T-cell nTPM: 91.0
Samples: 4
Max nTPM: 131.4
Min nTPM: 40.9
RHH5233_R3605
117.4
RHH5205_R3576
40.9
RHH5262_R3634
74.4
RHH5297_R3663
131.4
Memory CD4 T-cell TFH nTPM: 118.4
Samples: 4
Max nTPM: 181.3
Min nTPM: 62.5
RHH5300_R3666
137.7
RHH5236_R3608
181.3
RHH5265_R3637
91.9
RHH5208_R3579
62.5
Memory CD4 T-cell Th1 nTPM: 104.4
Samples: 4
Max nTPM: 173.0
Min nTPM: 62.3
RHH5210_R3581
115.6
RHH5302_R3668
173.0
RHH5238_R3610
62.3
RHH5267_R3639
66.8
Memory CD4 T-cell Th1/Th17 nTPM: 96.3
Samples: 4
Max nTPM: 167.0
Min nTPM: 27.2
RHH5303_R3669
167.0
RHH5211_R3582
102.5
RHH5239_R3611
27.2
RHH5268_R3640
88.4
Memory CD4 T-cell Th17 nTPM: 74.9
Samples: 4
Max nTPM: 98.8
Min nTPM: 55.4
RHH5304_R3670
81.6
RHH5212_R3583
98.8
RHH5240_R3612
55.4
RHH5269_R3641
63.6
Memory CD4 T-cell Th2 nTPM: 105.0
Samples: 4
Max nTPM: 139.6
Min nTPM: 73.8
RHH5305_R3671
114.5
RHH5213_R3584
92.1
RHH5241_R3613
139.6
RHH5270_R3642
73.8
Naive CD4 T-cell nTPM: 120.4
Samples: 4
Max nTPM: 156.6
Min nTPM: 77.4
RHH5306_R3672
156.6
RHH5214_R3585
137.1
RHH5242_R3614
110.3
RHH5271_R3643
77.4
Naive CD8 T-cell nTPM: 77.7
Samples: 4
Max nTPM: 107.6
Min nTPM: 34.9
RHH5201_R3572
84.7
RHH5229_R3601
34.9
RHH5258_R3630
107.6
RHH5287_R3659
83.5
Non-Vd2 gdTCR nTPM: 84.3
Samples: 4
Max nTPM: 140.9
Min nTPM: 35.4
RHH5235_R3607
35.4
RHH5264_R3636
106.0
RHH5207_R3578
54.7
RHH5299_R3665
140.9
T-reg nTPM: 111.2
Samples: 4
Max nTPM: 170.4
Min nTPM: 38.5
RHH5301_R3667
170.4
RHH5237_R3609
148.6
RHH5266_R3638
38.5
RHH5209_R3580
87.1
Terminal effector memory CD4 T-cell nTPM: 72.7
Samples: 2
Max nTPM: 112.3
Min nTPM: 33.0
RHH5243_R3615
33.0
RHH5272_R3644
112.3
Terminal effector memory CD8 T-cell nTPM: 95.9
Samples: 4
Max nTPM: 132.7
Min nTPM: 49.0
RHH5232_R3604
83.9
RHH5204_R3575
132.7
RHH5261_R3633
49.0
RHH5296_R3662
117.9
Vd2 gdTCR nTPM: 106.4
Samples: 4
Max nTPM: 155.1
Min nTPM: 61.5
RHH5234_R3606
114.0
RHH5206_R3577
94.8
RHH5263_R3635
61.5
RHH5298_R3664
155.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
