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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
213.2
nTPM
Monaco:
187.9
nTPM
Schmiedel:
830.3
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
213.2
HPA sample
nTPM
gdT-cell nTPM: 147.7
Samples: 6
Max nTPM: 185.2
Min nTPM: 93.7
P10809_1007
93.7
P10809_1022
179.2
P10809_1041
185.2
P10809_1060
141.2
P10809_1077
139.3
P10809_1098
147.7
MAIT T-cell nTPM: 188.3
Samples: 6
Max nTPM: 235.7
Min nTPM: 117.3
P10809_1006
117.3
P10809_1024
235.7
P10809_1043
216.4
P10809_1062
213.3
P10809_1083
150.6
P10809_1097
196.7
Memory CD4 T-cell nTPM: 170.3
Samples: 6
Max nTPM: 197.1
Min nTPM: 130.4
P10809_1014
130.4
P10809_1026
190.3
P10809_1045
197.1
P10809_1064
147.5
P10809_1086
179.0
P10809_1113
177.4
Memory CD8 T-cell nTPM: 160.3
Samples: 5
Max nTPM: 188.5
Min nTPM: 112.2
P10809_1012
112.2
P10809_1027
157.9
P10809_1046
188.5
P10809_1065
178.0
P10809_1111
165.0
Naive CD4 T-cell nTPM: 191.3
Samples: 6
Max nTPM: 303.6
Min nTPM: 114.0
P10809_1015
114.0
P10809_1030
191.0
P10809_1049
303.6
P10809_1068
186.7
P10809_1085
163.7
P10809_1112
188.8
Naive CD8 T-cell nTPM: 165.3
Samples: 6
Max nTPM: 191.7
Min nTPM: 113.1
P10809_1016
113.1
P10809_1031
185.3
P10809_1050
173.6
P10809_1069
191.7
P10809_1087
155.2
P10809_1110
172.6
T-reg nTPM: 213.2
Samples: 6
Max nTPM: 300.7
Min nTPM: 118.3
P10809_1018
118.3
P10809_1037
216.6
P10809_1056
300.7
P10809_1075
227.2
P10809_1094
193.7
P10809_1106
222.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
187.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 145.6
Samples: 4
Max nTPM: 180.8
Min nTPM: 111.0
RHH5202_R3573
161.7
RHH5230_R3602
180.8
RHH5259_R3631
111.0
RHH5288_R3660
128.8
Effector memory CD8 T-cell nTPM: 187.9
Samples: 4
Max nTPM: 227.6
Min nTPM: 146.8
RHH5203_R3574
227.6
RHH5231_R3603
199.8
RHH5260_R3632
146.8
RHH5289_R3661
177.4
MAIT T-cell nTPM: 176.9
Samples: 4
Max nTPM: 222.5
Min nTPM: 142.5
RHH5233_R3605
149.1
RHH5205_R3576
222.5
RHH5262_R3634
193.3
RHH5297_R3663
142.5
Memory CD4 T-cell TFH nTPM: 144.1
Samples: 4
Max nTPM: 165.8
Min nTPM: 118.5
RHH5300_R3666
118.5
RHH5236_R3608
165.8
RHH5265_R3637
138.6
RHH5208_R3579
153.4
Memory CD4 T-cell Th1 nTPM: 143.7
Samples: 4
Max nTPM: 182.7
Min nTPM: 116.6
RHH5210_R3581
182.7
RHH5302_R3668
139.5
RHH5238_R3610
116.6
RHH5267_R3639
135.8
Memory CD4 T-cell Th1/Th17 nTPM: 144.1
Samples: 4
Max nTPM: 190.5
Min nTPM: 101.5
RHH5303_R3669
162.9
RHH5211_R3582
190.5
RHH5239_R3611
101.5
RHH5268_R3640
121.3
Memory CD4 T-cell Th17 nTPM: 161.0
Samples: 4
Max nTPM: 194.0
Min nTPM: 134.3
RHH5304_R3670
160.4
RHH5212_R3583
194.0
RHH5240_R3612
155.3
RHH5269_R3641
134.3
Memory CD4 T-cell Th2 nTPM: 165.1
Samples: 4
Max nTPM: 190.6
Min nTPM: 140.2
RHH5305_R3671
150.4
RHH5213_R3584
190.6
RHH5241_R3613
179.2
RHH5270_R3642
140.2
Naive CD4 T-cell nTPM: 137.8
Samples: 4
Max nTPM: 167.9
Min nTPM: 112.0
RHH5306_R3672
121.6
RHH5214_R3585
167.9
RHH5242_R3614
149.7
RHH5271_R3643
112.0
Naive CD8 T-cell nTPM: 144.9
Samples: 4
Max nTPM: 187.4
Min nTPM: 104.2
RHH5201_R3572
187.4
RHH5229_R3601
104.2
RHH5258_R3630
129.0
RHH5287_R3659
158.8
Non-Vd2 gdTCR nTPM: 178.4
Samples: 4
Max nTPM: 211.5
Min nTPM: 136.3
RHH5235_R3607
173.5
RHH5264_R3636
211.5
RHH5207_R3578
192.3
RHH5299_R3665
136.3
T-reg nTPM: 131.1
Samples: 4
Max nTPM: 135.4
Min nTPM: 125.4
RHH5301_R3667
135.1
RHH5237_R3609
125.4
RHH5266_R3638
128.4
RHH5209_R3580
135.4
Terminal effector memory CD4 T-cell nTPM: 142.1
Samples: 2
Max nTPM: 158.1
Min nTPM: 126.0
RHH5243_R3615
126.0
RHH5272_R3644
158.1
Terminal effector memory CD8 T-cell nTPM: 144.4
Samples: 4
Max nTPM: 157.2
Min nTPM: 136.0
RHH5232_R3604
142.4
RHH5204_R3575
157.2
RHH5261_R3633
142.0
RHH5296_R3662
136.0
Vd2 gdTCR nTPM: 157.7
Samples: 4
Max nTPM: 195.0
Min nTPM: 111.6
RHH5234_R3606
155.0
RHH5206_R3577
195.0
RHH5263_R3635
169.1
RHH5298_R3664
111.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
