We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
22.4
nTPM
Monaco:
38.0
nTPM
Schmiedel:
39.7
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
22.4
HPA sample
nTPM
gdT-cell nTPM: 18.2
Samples: 6
Max nTPM: 23.2
Min nTPM: 15.6
P10809_1007
15.6
P10809_1022
23.2
P10809_1041
17.6
P10809_1060
16.2
P10809_1077
17.7
P10809_1098
18.7
MAIT T-cell nTPM: 22.5
Samples: 6
Max nTPM: 37.2
Min nTPM: 16.5
P10809_1006
16.5
P10809_1024
27.7
P10809_1043
19.4
P10809_1062
16.9
P10809_1083
17.0
P10809_1097
37.2
Memory CD4 T-cell nTPM: 5.4
Samples: 6
Max nTPM: 7.6
Min nTPM: 3.3
P10809_1014
3.3
P10809_1026
7.6
P10809_1045
3.9
P10809_1064
6.6
P10809_1086
3.7
P10809_1113
7.2
Memory CD8 T-cell nTPM: 15.7
Samples: 5
Max nTPM: 18.5
Min nTPM: 12.1
P10809_1012
12.1
P10809_1027
15.2
P10809_1046
18.5
P10809_1065
15.9
P10809_1111
16.9
Naive CD4 T-cell nTPM: 7.1
Samples: 6
Max nTPM: 9.7
Min nTPM: 4.2
P10809_1015
5.9
P10809_1030
7.0
P10809_1049
4.2
P10809_1068
6.8
P10809_1085
9.0
P10809_1112
9.7
Naive CD8 T-cell nTPM: 22.0
Samples: 6
Max nTPM: 26.0
Min nTPM: 13.2
P10809_1016
24.3
P10809_1031
20.6
P10809_1050
22.3
P10809_1069
25.8
P10809_1087
13.2
P10809_1110
26.0
T-reg nTPM: 4.1
Samples: 6
Max nTPM: 7.6
Min nTPM: 1.7
P10809_1018
1.7
P10809_1037
4.1
P10809_1056
7.6
P10809_1075
4.8
P10809_1094
4.0
P10809_1106
2.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
38.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 27.6
Samples: 4
Max nTPM: 36.1
Min nTPM: 19.0
RHH5202_R3573
32.1
RHH5230_R3602
19.0
RHH5259_R3631
23.1
RHH5288_R3660
36.1
Effector memory CD8 T-cell nTPM: 28.3
Samples: 4
Max nTPM: 31.0
Min nTPM: 26.6
RHH5203_R3574
31.0
RHH5231_R3603
27.9
RHH5260_R3632
26.6
RHH5289_R3661
27.6
MAIT T-cell nTPM: 26.8
Samples: 4
Max nTPM: 34.9
Min nTPM: 18.4
RHH5233_R3605
34.9
RHH5205_R3576
24.5
RHH5262_R3634
18.4
RHH5297_R3663
29.4
Memory CD4 T-cell TFH nTPM: 7.0
Samples: 4
Max nTPM: 8.9
Min nTPM: 4.9
RHH5300_R3666
8.7
RHH5236_R3608
4.9
RHH5265_R3637
8.9
RHH5208_R3579
5.3
Memory CD4 T-cell Th1 nTPM: 5.8
Samples: 4
Max nTPM: 13.0
Min nTPM: 0.8
RHH5210_R3581
13.0
RHH5302_R3668
2.5
RHH5238_R3610
0.8
RHH5267_R3639
7.0
Memory CD4 T-cell Th1/Th17 nTPM: 4.3
Samples: 4
Max nTPM: 7.9
Min nTPM: 2.6
RHH5303_R3669
3.8
RHH5211_R3582
7.9
RHH5239_R3611
2.6
RHH5268_R3640
2.9
Memory CD4 T-cell Th17 nTPM: 8.6
Samples: 4
Max nTPM: 11.6
Min nTPM: 4.3
RHH5304_R3670
9.8
RHH5212_R3583
8.8
RHH5240_R3612
11.6
RHH5269_R3641
4.3
Memory CD4 T-cell Th2 nTPM: 15.0
Samples: 4
Max nTPM: 20.1
Min nTPM: 8.4
RHH5305_R3671
15.8
RHH5213_R3584
20.1
RHH5241_R3613
15.6
RHH5270_R3642
8.4
Naive CD4 T-cell nTPM: 12.0
Samples: 4
Max nTPM: 21.0
Min nTPM: 3.9
RHH5306_R3672
9.5
RHH5214_R3585
13.7
RHH5242_R3614
21.0
RHH5271_R3643
3.9
Naive CD8 T-cell nTPM: 38.1
Samples: 4
Max nTPM: 49.1
Min nTPM: 28.2
RHH5201_R3572
33.7
RHH5229_R3601
28.2
RHH5258_R3630
41.2
RHH5287_R3659
49.1
Non-Vd2 gdTCR nTPM: 34.5
Samples: 4
Max nTPM: 50.5
Min nTPM: 24.1
RHH5235_R3607
35.6
RHH5264_R3636
24.1
RHH5207_R3578
50.5
RHH5299_R3665
27.7
T-reg nTPM: 8.4
Samples: 4
Max nTPM: 15.6
Min nTPM: 2.2
RHH5301_R3667
7.1
RHH5237_R3609
15.6
RHH5266_R3638
2.2
RHH5209_R3580
8.7
Terminal effector memory CD4 T-cell nTPM: 11.5
Samples: 2
Max nTPM: 22.2
Min nTPM: 0.7
RHH5243_R3615
22.2
RHH5272_R3644
0.7
Terminal effector memory CD8 T-cell nTPM: 28.3
Samples: 4
Max nTPM: 40.4
Min nTPM: 11.3
RHH5232_R3604
40.4
RHH5204_R3575
23.4
RHH5261_R3633
11.3
RHH5296_R3662
38.2
Vd2 gdTCR nTPM: 35.3
Samples: 4
Max nTPM: 38.1
Min nTPM: 31.8
RHH5234_R3606
37.1
RHH5206_R3577
31.8
RHH5263_R3635
34.0
RHH5298_R3664
38.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
