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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
36.2
nTPM
Monaco:
15.8
nTPM
Schmiedel:
17.9
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
36.2
HPA sample
nTPM
gdT-cell nTPM: 28.2
Samples: 6
Max nTPM: 36.8
Min nTPM: 18.2
P10809_1007
18.2
P10809_1022
35.8
P10809_1041
36.8
P10809_1060
20.8
P10809_1077
27.8
P10809_1098
29.8
MAIT T-cell nTPM: 35.3
Samples: 6
Max nTPM: 54.3
Min nTPM: 22.6
P10809_1006
22.6
P10809_1024
30.5
P10809_1043
54.3
P10809_1062
29.6
P10809_1083
35.1
P10809_1097
39.5
Memory CD4 T-cell nTPM: 31.2
Samples: 6
Max nTPM: 38.5
Min nTPM: 22.2
P10809_1014
22.2
P10809_1026
36.6
P10809_1045
38.5
P10809_1064
36.2
P10809_1086
25.0
P10809_1113
28.6
Memory CD8 T-cell nTPM: 30.6
Samples: 5
Max nTPM: 40.0
Min nTPM: 23.3
P10809_1012
23.3
P10809_1027
40.0
P10809_1046
35.3
P10809_1065
25.7
P10809_1111
28.9
Naive CD4 T-cell nTPM: 36.2
Samples: 6
Max nTPM: 53.9
Min nTPM: 17.9
P10809_1015
17.9
P10809_1030
39.7
P10809_1049
53.9
P10809_1068
36.7
P10809_1085
35.6
P10809_1112
33.4
Naive CD8 T-cell nTPM: 30.3
Samples: 6
Max nTPM: 38.1
Min nTPM: 20.4
P10809_1016
20.4
P10809_1031
36.1
P10809_1050
28.7
P10809_1069
37.5
P10809_1087
21.0
P10809_1110
38.1
T-reg nTPM: 34.8
Samples: 6
Max nTPM: 81.4
Min nTPM: 15.7
P10809_1018
15.7
P10809_1037
26.3
P10809_1056
81.4
P10809_1075
34.5
P10809_1094
24.0
P10809_1106
26.8
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
15.8
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 6.2
Samples: 4
Max nTPM: 9.1
Min nTPM: 3.1
RHH5202_R3573
3.1
RHH5230_R3602
6.4
RHH5259_R3631
9.1
RHH5288_R3660
6.1
Effector memory CD8 T-cell nTPM: 10.5
Samples: 4
Max nTPM: 23.2
Min nTPM: 1.6
RHH5203_R3574
1.6
RHH5231_R3603
23.2
RHH5260_R3632
15.2
RHH5289_R3661
2.0
MAIT T-cell nTPM: 7.8
Samples: 4
Max nTPM: 13.9
Min nTPM: 2.1
RHH5233_R3605
3.9
RHH5205_R3576
2.1
RHH5262_R3634
11.3
RHH5297_R3663
13.9
Memory CD4 T-cell TFH nTPM: 15.8
Samples: 4
Max nTPM: 23.7
Min nTPM: 8.3
RHH5300_R3666
8.3
RHH5236_R3608
23.7
RHH5265_R3637
20.1
RHH5208_R3579
11.2
Memory CD4 T-cell Th1 nTPM: 10.4
Samples: 4
Max nTPM: 15.8
Min nTPM: 4.5
RHH5210_R3581
10.3
RHH5302_R3668
15.8
RHH5238_R3610
4.5
RHH5267_R3639
10.9
Memory CD4 T-cell Th1/Th17 nTPM: 9.9
Samples: 4
Max nTPM: 22.8
Min nTPM: 2.3
RHH5303_R3669
2.3
RHH5211_R3582
22.8
RHH5239_R3611
8.4
RHH5268_R3640
6.0
Memory CD4 T-cell Th17 nTPM: 10.6
Samples: 4
Max nTPM: 14.4
Min nTPM: 8.6
RHH5304_R3670
9.8
RHH5212_R3583
14.4
RHH5240_R3612
9.7
RHH5269_R3641
8.6
Memory CD4 T-cell Th2 nTPM: 15.0
Samples: 4
Max nTPM: 23.7
Min nTPM: 7.0
RHH5305_R3671
23.7
RHH5213_R3584
15.6
RHH5241_R3613
7.0
RHH5270_R3642
13.6
Naive CD4 T-cell nTPM: 10.3
Samples: 4
Max nTPM: 17.7
Min nTPM: 3.2
RHH5306_R3672
17.7
RHH5214_R3585
16.8
RHH5242_R3614
3.2
RHH5271_R3643
3.5
Naive CD8 T-cell nTPM: 6.4
Samples: 4
Max nTPM: 12.2
Min nTPM: 1.5
RHH5201_R3572
1.5
RHH5229_R3601
3.4
RHH5258_R3630
12.2
RHH5287_R3659
8.5
Non-Vd2 gdTCR nTPM: 9.8
Samples: 4
Max nTPM: 15.1
Min nTPM: 3.4
RHH5235_R3607
10.6
RHH5264_R3636
15.1
RHH5207_R3578
3.4
RHH5299_R3665
10.1
T-reg nTPM: 14.7
Samples: 4
Max nTPM: 24.6
Min nTPM: 8.6
RHH5301_R3667
12.3
RHH5237_R3609
24.6
RHH5266_R3638
8.6
RHH5209_R3580
13.3
Terminal effector memory CD4 T-cell nTPM: 11.2
Samples: 2
Max nTPM: 11.8
Min nTPM: 10.5
RHH5243_R3615
10.5
RHH5272_R3644
11.8
Terminal effector memory CD8 T-cell nTPM: 7.9
Samples: 4
Max nTPM: 12.4
Min nTPM: 3.4
RHH5232_R3604
6.7
RHH5204_R3575
8.9
RHH5261_R3633
12.4
RHH5296_R3662
3.4
Vd2 gdTCR nTPM: 10.0
Samples: 4
Max nTPM: 11.4
Min nTPM: 8.6
RHH5234_R3606
9.5
RHH5206_R3577
8.6
RHH5263_R3635
11.4
RHH5298_R3664
10.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
