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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
49.4
nTPM
Monaco:
143.3
nTPM
Schmiedel:
117.8
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
49.4
HPA sample
nTPM
gdT-cell nTPM: 31.3
Samples: 6
Max nTPM: 39.8
Min nTPM: 23.5
P10809_1007
31.2
P10809_1022
39.8
P10809_1041
29.0
P10809_1060
31.0
P10809_1077
23.5
P10809_1098
33.4
MAIT T-cell nTPM: 45.4
Samples: 6
Max nTPM: 57.5
Min nTPM: 32.6
P10809_1006
55.1
P10809_1024
57.5
P10809_1043
42.7
P10809_1062
39.0
P10809_1083
32.6
P10809_1097
45.5
Memory CD4 T-cell nTPM: 37.4
Samples: 6
Max nTPM: 45.6
Min nTPM: 27.2
P10809_1014
40.7
P10809_1026
43.8
P10809_1045
34.9
P10809_1064
27.2
P10809_1086
32.2
P10809_1113
45.6
Memory CD8 T-cell nTPM: 36.6
Samples: 5
Max nTPM: 43.0
Min nTPM: 27.4
P10809_1012
43.0
P10809_1027
42.8
P10809_1046
36.2
P10809_1065
27.4
P10809_1111
33.8
Naive CD4 T-cell nTPM: 28.3
Samples: 6
Max nTPM: 34.9
Min nTPM: 23.2
P10809_1015
29.6
P10809_1030
34.9
P10809_1049
23.3
P10809_1068
28.9
P10809_1085
23.2
P10809_1112
29.8
Naive CD8 T-cell nTPM: 32.6
Samples: 6
Max nTPM: 47.5
Min nTPM: 25.6
P10809_1016
31.5
P10809_1031
47.5
P10809_1050
29.2
P10809_1069
30.9
P10809_1087
25.6
P10809_1110
31.1
T-reg nTPM: 49.4
Samples: 6
Max nTPM: 79.0
Min nTPM: 29.3
P10809_1018
49.8
P10809_1037
79.0
P10809_1056
40.1
P10809_1075
29.3
P10809_1094
30.8
P10809_1106
67.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
143.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 108.4
Samples: 4
Max nTPM: 125.5
Min nTPM: 83.4
RHH5202_R3573
117.2
RHH5230_R3602
83.4
RHH5259_R3631
125.5
RHH5288_R3660
107.4
Effector memory CD8 T-cell nTPM: 143.3
Samples: 4
Max nTPM: 156.5
Min nTPM: 120.9
RHH5203_R3574
142.1
RHH5231_R3603
120.9
RHH5260_R3632
156.5
RHH5289_R3661
153.5
MAIT T-cell nTPM: 118.3
Samples: 4
Max nTPM: 129.6
Min nTPM: 105.0
RHH5233_R3605
112.9
RHH5205_R3576
129.6
RHH5262_R3634
105.0
RHH5297_R3663
125.6
Memory CD4 T-cell TFH nTPM: 128.9
Samples: 4
Max nTPM: 132.5
Min nTPM: 125.1
RHH5300_R3666
125.1
RHH5236_R3608
132.2
RHH5265_R3637
125.9
RHH5208_R3579
132.5
Memory CD4 T-cell Th1 nTPM: 121.0
Samples: 4
Max nTPM: 160.5
Min nTPM: 97.1
RHH5210_R3581
97.1
RHH5302_R3668
116.0
RHH5238_R3610
160.5
RHH5267_R3639
110.2
Memory CD4 T-cell Th1/Th17 nTPM: 118.8
Samples: 4
Max nTPM: 136.0
Min nTPM: 89.6
RHH5303_R3669
122.9
RHH5211_R3582
126.8
RHH5239_R3611
136.0
RHH5268_R3640
89.6
Memory CD4 T-cell Th17 nTPM: 132.1
Samples: 4
Max nTPM: 162.9
Min nTPM: 119.7
RHH5304_R3670
123.6
RHH5212_R3583
122.1
RHH5240_R3612
162.9
RHH5269_R3641
119.7
Memory CD4 T-cell Th2 nTPM: 127.6
Samples: 4
Max nTPM: 141.7
Min nTPM: 112.6
RHH5305_R3671
139.1
RHH5213_R3584
141.7
RHH5241_R3613
117.0
RHH5270_R3642
112.6
Naive CD4 T-cell nTPM: 82.7
Samples: 4
Max nTPM: 86.8
Min nTPM: 78.2
RHH5306_R3672
86.8
RHH5214_R3585
78.2
RHH5242_R3614
83.2
RHH5271_R3643
82.5
Naive CD8 T-cell nTPM: 97.5
Samples: 4
Max nTPM: 118.9
Min nTPM: 77.9
RHH5201_R3572
105.2
RHH5229_R3601
118.9
RHH5258_R3630
77.9
RHH5287_R3659
88.1
Non-Vd2 gdTCR nTPM: 115.5
Samples: 4
Max nTPM: 123.5
Min nTPM: 110.0
RHH5235_R3607
110.0
RHH5264_R3636
123.5
RHH5207_R3578
117.1
RHH5299_R3665
111.2
T-reg nTPM: 131.5
Samples: 4
Max nTPM: 168.2
Min nTPM: 114.5
RHH5301_R3667
120.7
RHH5237_R3609
168.2
RHH5266_R3638
114.5
RHH5209_R3580
122.6
Terminal effector memory CD4 T-cell nTPM: 107.5
Samples: 2
Max nTPM: 113.9
Min nTPM: 101.0
RHH5243_R3615
101.0
RHH5272_R3644
113.9
Terminal effector memory CD8 T-cell nTPM: 118.3
Samples: 4
Max nTPM: 152.3
Min nTPM: 83.4
RHH5232_R3604
115.5
RHH5204_R3575
83.4
RHH5261_R3633
152.3
RHH5296_R3662
122.0
Vd2 gdTCR nTPM: 110.8
Samples: 4
Max nTPM: 136.2
Min nTPM: 94.5
RHH5234_R3606
102.8
RHH5206_R3577
94.5
RHH5263_R3635
136.2
RHH5298_R3664
109.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
