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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
76.4
nTPM
Monaco:
118.1
nTPM
Schmiedel:
90.5
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
76.4
HPA sample
nTPM
gdT-cell nTPM: 46.5
Samples: 6
Max nTPM: 63.5
Min nTPM: 35.0
P10809_1007
37.6
P10809_1022
54.2
P10809_1041
63.5
P10809_1060
37.6
P10809_1077
35.0
P10809_1098
50.9
MAIT T-cell nTPM: 48.8
Samples: 6
Max nTPM: 59.6
Min nTPM: 41.9
P10809_1006
46.4
P10809_1024
59.6
P10809_1043
49.2
P10809_1062
49.9
P10809_1083
41.9
P10809_1097
45.9
Memory CD4 T-cell nTPM: 44.7
Samples: 6
Max nTPM: 57.6
Min nTPM: 38.1
P10809_1014
39.5
P10809_1026
57.6
P10809_1045
47.5
P10809_1064
43.1
P10809_1086
38.1
P10809_1113
42.5
Memory CD8 T-cell nTPM: 43.1
Samples: 5
Max nTPM: 50.8
Min nTPM: 35.5
P10809_1012
42.8
P10809_1027
50.8
P10809_1046
48.1
P10809_1065
38.4
P10809_1111
35.5
Naive CD4 T-cell nTPM: 76.4
Samples: 6
Max nTPM: 94.2
Min nTPM: 54.5
P10809_1015
54.5
P10809_1030
76.7
P10809_1049
79.1
P10809_1068
84.9
P10809_1085
69.0
P10809_1112
94.2
Naive CD8 T-cell nTPM: 63.6
Samples: 6
Max nTPM: 88.2
Min nTPM: 35.4
P10809_1016
67.8
P10809_1031
88.2
P10809_1050
64.1
P10809_1069
64.9
P10809_1087
35.4
P10809_1110
61.1
T-reg nTPM: 44.8
Samples: 6
Max nTPM: 49.9
Min nTPM: 36.7
P10809_1018
43.3
P10809_1037
47.8
P10809_1056
46.9
P10809_1075
44.4
P10809_1094
49.9
P10809_1106
36.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
118.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 74.6
Samples: 4
Max nTPM: 88.2
Min nTPM: 54.1
RHH5202_R3573
88.2
RHH5230_R3602
78.5
RHH5259_R3631
54.1
RHH5288_R3660
77.4
Effector memory CD8 T-cell nTPM: 80.9
Samples: 4
Max nTPM: 87.3
Min nTPM: 78.1
RHH5203_R3574
80.2
RHH5231_R3603
87.3
RHH5260_R3632
78.1
RHH5289_R3661
78.1
MAIT T-cell nTPM: 91.4
Samples: 4
Max nTPM: 104.3
Min nTPM: 72.4
RHH5233_R3605
93.9
RHH5205_R3576
94.8
RHH5262_R3634
104.3
RHH5297_R3663
72.4
Memory CD4 T-cell TFH nTPM: 85.0
Samples: 4
Max nTPM: 95.3
Min nTPM: 64.8
RHH5300_R3666
64.8
RHH5236_R3608
95.3
RHH5265_R3637
94.0
RHH5208_R3579
85.9
Memory CD4 T-cell Th1 nTPM: 75.0
Samples: 4
Max nTPM: 83.5
Min nTPM: 60.8
RHH5210_R3581
77.7
RHH5302_R3668
77.9
RHH5238_R3610
60.8
RHH5267_R3639
83.5
Memory CD4 T-cell Th1/Th17 nTPM: 85.8
Samples: 4
Max nTPM: 104.4
Min nTPM: 45.6
RHH5303_R3669
104.4
RHH5211_R3582
96.7
RHH5239_R3611
45.6
RHH5268_R3640
96.5
Memory CD4 T-cell Th17 nTPM: 79.8
Samples: 4
Max nTPM: 91.8
Min nTPM: 65.1
RHH5304_R3670
70.8
RHH5212_R3583
91.8
RHH5240_R3612
65.1
RHH5269_R3641
91.6
Memory CD4 T-cell Th2 nTPM: 74.6
Samples: 4
Max nTPM: 83.8
Min nTPM: 67.2
RHH5305_R3671
69.7
RHH5213_R3584
83.8
RHH5241_R3613
67.2
RHH5270_R3642
77.5
Naive CD4 T-cell nTPM: 107.0
Samples: 4
Max nTPM: 120.3
Min nTPM: 88.3
RHH5306_R3672
120.3
RHH5214_R3585
106.2
RHH5242_R3614
88.3
RHH5271_R3643
113.1
Naive CD8 T-cell nTPM: 118.1
Samples: 4
Max nTPM: 141.0
Min nTPM: 61.9
RHH5201_R3572
139.0
RHH5229_R3601
61.9
RHH5258_R3630
141.0
RHH5287_R3659
130.5
Non-Vd2 gdTCR nTPM: 86.5
Samples: 4
Max nTPM: 100.1
Min nTPM: 65.2
RHH5235_R3607
65.2
RHH5264_R3636
100.1
RHH5207_R3578
99.9
RHH5299_R3665
80.7
T-reg nTPM: 86.6
Samples: 4
Max nTPM: 99.0
Min nTPM: 70.7
RHH5301_R3667
86.3
RHH5237_R3609
99.0
RHH5266_R3638
90.3
RHH5209_R3580
70.7
Terminal effector memory CD4 T-cell nTPM: 83.7
Samples: 2
Max nTPM: 94.6
Min nTPM: 72.8
RHH5243_R3615
72.8
RHH5272_R3644
94.6
Terminal effector memory CD8 T-cell nTPM: 82.9
Samples: 4
Max nTPM: 93.8
Min nTPM: 67.4
RHH5232_R3604
84.6
RHH5204_R3575
67.4
RHH5261_R3633
93.8
RHH5296_R3662
85.8
Vd2 gdTCR nTPM: 80.5
Samples: 4
Max nTPM: 101.8
Min nTPM: 66.6
RHH5234_R3606
101.8
RHH5206_R3577
78.4
RHH5263_R3635
75.2
RHH5298_R3664
66.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
