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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
150.6
nTPM
HPA Brain:
200.5
nTPM
GTEx:
150.6
nTPM
FANTOM5:
172.2
Scaled Tags Per Million
Pig:
170.5
nTPM
Mouse:
30.2
nTPM
Allen mouse:
0.7
Expression energy
MIDBRAIN - HPA Brain RNA-seq
Max nTPM
200.5
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 183.7
2586
Male, age 75, left hemisphere
276.0
2019
Male, age 18, unknown
225.6
2828
Female, age 72, unknown
203.4
2411
Female, age 72, unknown
173.7
2666
Male, age 74, left hemisphere
171.6
1827
Male, age 72, unknown
168.8
1833
Male, age 53, unknown
166.1
1870
Female, age 42, unknown
154.6
1830
Male, age 51, unknown
153.6
2219
Male, age 76, both hemispheres
143.3
Dorsal raphe nucleus nTPM: 200.5
2298
Female, age 72, unknown
218.1
1828
Male, age 53, unknown
197.8
2750
Male, age 76, both hemispheres
196.3
2047
Male, age 72, unknown
195.5
2016
Female, age 72, unknown
194.9
Inferior colliculus nTPM: 170.2
1890
Male, age 53, unknown
197.9
2097
Female, age 72, unknown
170.6
1848
Female, age 42, unknown
157.5
2849
Male, age 72, unknown
154.9
Median raphe nucleus nTPM: 146.6
2220
Male, age 76, midline
146.6
Periaquaductal grey, anterior nTPM: 179.1
1795
Male, age 51, unknown
200.1
2502
Female, age 75, unknown
169.0
1947
Male, age 18, unknown
168.2
Periaquaductal grey, dorsal nTPM: 179.5
2850
Male, age 76, both hemispheres
208.1
2464
Female, age 72, unknown
171.2
1840
Male, age 53, unknown
170.3
1831
Male, age 72, unknown
168.4
Periaquaductal grey, lateral nTPM: 172.5
2140
Male, age 76, both hemispheres
181.4
2272
Male, age 74, both hemispheres
175.1
2053
Male, age 18, unknown
161.0
Pretectal area nTPM: 199.4
1817
Female, age 42, unknown
253.9
1944
Female, age 72, unknown
238.0
2667
Female, age 75, unknown
235.1
1816
Male, age 51, unknown
233.7
2007
Male, age 72, unknown
221.1
1815
Male, age 53, unknown
208.6
2273
Male, age 74, both hemispheres
195.4
2224
Female, age 72, unknown
167.7
2407
Male, age 75, both hemispheres
150.7
2825
Male, age 18, unknown
145.7
2316
Male, age 76, right hemisphere
143.0
Red nucleus nTPM: 188.8
2785
Male, age 18, unknown
223.0
2823
Male, age 76, right hemisphere
203.2
1821
Female, age 72, unknown
197.6
2503
Female, age 72, unknown
197.6
1904
Male, age 53, unknown
195.6
2725
Female, age 75, unknown
190.7
2769
Male, age 72, unknown
189.9
2227
Male, age 72, unknown
186.3
1954
Female, age 42, unknown
182.0
1865
Male, age 51, unknown
179.2
2588
Male, age 74, left hemisphere
166.3
2584
Male, age 75, left hemisphere
154.8
Substantia nigra nTPM: 191.7
1851
Male, age 51, unknown
219.1
1889
Female, age 72, unknown
214.1
1916
Female, age 42, unknown
203.4
2409
Female, age 72, unknown
199.6
2665
Male, age 74, both hemispheres
196.2
2699
Male, age 18, unknown
186.6
2583
Male, age 75, right hemisphere
184.4
1941
Male, age 53, unknown
184.0
2241
Male, age 72, unknown
167.7
2590
Female, age 75, unknown
162.0
Superior colliculus nTPM: 186.9
1995
Male, age 72, unknown
236.4
2087
Female, age 72, unknown
202.1
1913
Female, age 42, unknown
199.8
2664
Male, age 75, both hemispheres
198.7
2261
Male, age 18, unknown
194.2
2668
Female, age 75, unknown
188.8
1796
Male, age 53, unknown
188.0
1895
Male, age 76, right hemisphere
157.7
2587
Male, age 74, left hemisphere
154.1
1839
Male, age 51, unknown
149.1
Ventral tegmental area nTPM: 164.3
2410
Female, age 72, unknown
192.5
1915
Female, age 42, unknown
171.1
2218
Male, age 76, both hemispheres
162.8
1942
Male, age 51, unknown
162.6
2021
Male, age 53, unknown
148.8
2223
Female, age 72, unknown
148.3
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
150.6
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 150.6
Samples: 139
Max nTPM: 753.5
Min nTPM: 41.1
Std nTPM: 98.3
Median nTPM: 125.6
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
753.5
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
575.5
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
474.6
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
473.9
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
368.8
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
346.6
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
344.4
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
334.9
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
327.9
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
298.9
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
282.5
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
245.5
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
239.8
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
238.4
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
235.4
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
234.4
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
226.7
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
225.4
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
224.3
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
209.5
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
207.2
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
204.8
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
203.1
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
201.6
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
200.7
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
198.9
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
193.6
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
192.2
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
192.2
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
188.4
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
187.6
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
187.4
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
184.3
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
183.0
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
168.4
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
167.9
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
167.8
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
160.7
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
160.5
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
158.9
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
158.9
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
156.8
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
156.7
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
153.3
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
153.0
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
152.2
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
150.0
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
149.9
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
149.6
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
148.3
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
146.3
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
145.6
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
143.0
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
141.3
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
141.1
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
141.0
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
140.2
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
140.1
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
138.3
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
135.6
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
133.5
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
132.9
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
132.0
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
127.9
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
127.1
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
126.5
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
126.3
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
126.0
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
125.8
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
125.6
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
125.1
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
123.5
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
123.2
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
122.5
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
121.5
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
119.8
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
117.6
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
116.3
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
115.2
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
114.7
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
113.4
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
112.1
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
110.7
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
110.0
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
110.0
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
109.7
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
108.4
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
108.3
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
108.0
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
107.6
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
106.6
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
105.6
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
105.5
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
105.5
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
104.7
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
103.1
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
103.0
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
101.7
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
98.7
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
98.2
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
97.7
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
97.7
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
97.5
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
95.2
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
94.4
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
94.0
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
93.7
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
92.7
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
91.5
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
90.8
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
90.5
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
89.2
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
88.5
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
88.1
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
84.8
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
83.6
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
83.6
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
82.5
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
80.5
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
77.9
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
77.4
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
77.0
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
75.5
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
74.0
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
73.7
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
68.8
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
68.7
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
68.5
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
66.6
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
66.1
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
62.2
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
61.6
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
61.2
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
59.8
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
57.7
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
56.1
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
55.7
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
44.2
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
41.1
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
30.2
Mouse sample
Sample description
nTPM
Midbrain nTPM: 30.2
Samples: 4
Max nTPM: 33.4
Min nTPM: 26.5
Sample A
Male
33.4
Sample B
Male
26.5
Sample C
Female
31.4
Sample D
Female
29.5
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.