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EPHX1
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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:149.7 nTPM
FANTOM5:194.4 Scaled Tags Per Million
Pig:63.4 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA020593Antibody HPA048847
Glial cells Not detectedNot detected
Neuronal cells Not detectedNot detected

CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM 149.7
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 149.7
Samples: 246

Max nTPM: 657.3
Min nTPM: 25.5
Std nTPM: 83.8
Median nTPM: 133.9
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 657.3
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 536.0
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 481.2
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 449.1
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 411.2
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 378.2
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 376.0
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 354.4
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 347.5
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 301.6
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 299.0
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 291.8
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 283.4
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 280.2
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 279.0
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 277.3
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 271.1
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 265.1
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 265.1
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 262.8
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 260.0
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 253.3
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 250.5
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 248.3
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 242.0
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 234.6
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 232.7
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 232.3
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 230.2
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 229.6
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 229.6
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 229.2
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 226.3
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 224.8
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 223.9
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 219.4
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 214.4
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 212.5
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 210.2
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 210.1
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 209.2
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 208.8
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 208.6
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 208.6
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 206.8
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 203.6
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 203.5
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 202.5
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 199.3
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 195.0
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 194.7
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 194.1
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 193.7
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 192.7
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 191.8
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 190.7
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 189.0
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 188.8
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 187.7
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 187.2
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 187.0
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 185.7
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 184.3
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 184.0
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 181.3
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 179.9
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 177.9
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 177.5
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 174.3
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 173.3
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 172.9
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 171.6
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 171.3
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 170.4
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 170.4
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 169.4
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 165.7
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 164.2
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 163.3
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 162.7
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 162.7
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 161.9
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 161.7
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 161.4
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 160.6
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 159.0
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 157.9
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 156.6
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 156.5
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 156.1
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 154.4
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 153.2
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 152.9
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 151.7
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 149.9
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 149.2
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 149.1
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 149.0
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 148.8
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 145.8
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 145.1
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 144.2
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 143.8
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 143.6
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 143.3
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 143.2
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 141.8
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 141.5
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 140.8
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 140.6
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 140.2
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 140.1
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 139.2
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 138.1
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 137.8
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 137.2
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 137.2
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 136.3
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 135.7
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 135.4
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 134.7
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 134.3
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 133.9
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 133.8
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 133.6
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 133.5
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 132.7
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 131.9
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 131.3
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 130.2
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 130.0
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 129.7
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 129.3
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 128.5
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 128.0
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 127.9
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 124.2
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 123.5
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 122.5
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 122.4
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 121.7
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 120.3
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 120.0
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 118.8
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 118.7
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 118.1
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 117.0
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 116.7
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 116.1
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 115.7
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 114.1
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 113.9
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 113.6
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 113.2
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 112.1
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 111.5
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 110.2
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 109.8
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 109.4
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 109.2
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 108.6
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 108.5
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 108.1
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 107.3
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 106.7
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 106.6
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 106.5
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 106.1
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 105.3
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 104.2
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 103.4
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 101.6
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 101.6
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 101.5
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 100.9
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 99.2
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 98.4
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 98.0
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 97.5
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 97.4
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 97.0
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 96.6
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 96.3
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 96.0
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 95.3
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 95.1
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 94.1
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 93.8
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 92.8
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 91.6
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 90.3
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 90.3
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 89.6
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 89.6
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 88.3
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 88.0
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 86.7
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 86.1
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 85.8
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 85.3
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 85.1
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 84.7
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 84.6
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 84.2
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 84.1
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 83.8
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 82.5
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 82.2
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 79.5
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 78.8
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 78.4
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 78.0
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 76.5
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 76.4
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 75.1
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 73.9
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 73.3
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 72.5
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 72.5
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 72.2
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 72.0
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 71.4
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 68.5
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 67.9
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 67.4
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 67.2
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 65.5
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 64.5
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 62.0
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 60.0
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 59.3
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 59.2
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 58.9
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 57.8
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 53.9
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 53.2
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 52.7
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 50.1
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 47.5
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 46.2
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 44.1
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 44.0
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 41.5
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 33.1
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 29.9
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 25.5
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max Scaled Tags Per Million 194.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 194.4
FF:10164-103B2 76 years, female 194.4

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM 63.4
Pig sample Sample description nTPM
Caudate
nTPM: 63.4
Samples: 4

Max nTPM: 84.7
Min nTPM: 44.4
Sample A Female 65.8
Sample B Female 84.7
Sample C Male 58.6
Sample D Male 44.4

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