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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
228.2
nTPM
Monaco:
951.7
nTPM
Schmiedel:
227.6
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
228.2
HPA sample
nTPM
gdT-cell nTPM: 140.0
Samples: 6
Max nTPM: 211.9
Min nTPM: 61.8
P10809_1007
193.0
P10809_1022
80.2
P10809_1041
61.8
P10809_1060
144.1
P10809_1077
211.9
P10809_1098
148.9
MAIT T-cell nTPM: 178.1
Samples: 6
Max nTPM: 245.5
Min nTPM: 71.4
P10809_1006
245.5
P10809_1024
155.6
P10809_1043
71.4
P10809_1062
150.0
P10809_1083
228.6
P10809_1097
217.3
Memory CD4 T-cell nTPM: 204.2
Samples: 6
Max nTPM: 349.7
Min nTPM: 62.6
P10809_1014
349.7
P10809_1026
62.6
P10809_1045
66.3
P10809_1064
241.1
P10809_1086
287.3
P10809_1113
218.0
Memory CD8 T-cell nTPM: 213.2
Samples: 5
Max nTPM: 290.6
Min nTPM: 83.1
P10809_1012
290.6
P10809_1027
154.5
P10809_1046
83.1
P10809_1065
267.9
P10809_1111
270.1
Naive CD4 T-cell nTPM: 174.3
Samples: 6
Max nTPM: 370.8
Min nTPM: 74.3
P10809_1015
370.8
P10809_1030
80.7
P10809_1049
74.3
P10809_1068
167.5
P10809_1085
180.9
P10809_1112
171.5
Naive CD8 T-cell nTPM: 202.4
Samples: 6
Max nTPM: 309.5
Min nTPM: 105.5
P10809_1016
301.6
P10809_1031
105.5
P10809_1050
129.2
P10809_1069
169.6
P10809_1087
309.5
P10809_1110
199.0
T-reg nTPM: 228.2
Samples: 6
Max nTPM: 370.5
Min nTPM: 67.3
P10809_1018
370.5
P10809_1037
136.6
P10809_1056
67.3
P10809_1075
281.4
P10809_1094
214.3
P10809_1106
299.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
951.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 721.2
Samples: 4
Max nTPM: 989.9
Min nTPM: 463.3
RHH5202_R3573
989.9
RHH5230_R3602
463.3
RHH5259_R3631
478.7
RHH5288_R3660
952.9
Effector memory CD8 T-cell nTPM: 898.8
Samples: 4
Max nTPM: 1100.9
Min nTPM: 564.9
RHH5203_R3574
1006.9
RHH5231_R3603
1100.9
RHH5260_R3632
564.9
RHH5289_R3661
922.6
MAIT T-cell nTPM: 698.8
Samples: 4
Max nTPM: 807.6
Min nTPM: 560.5
RHH5233_R3605
807.6
RHH5205_R3576
560.5
RHH5262_R3634
647.1
RHH5297_R3663
779.9
Memory CD4 T-cell TFH nTPM: 943.8
Samples: 4
Max nTPM: 1243.9
Min nTPM: 700.1
RHH5300_R3666
700.1
RHH5236_R3608
1243.9
RHH5265_R3637
815.3
RHH5208_R3579
1015.9
Memory CD4 T-cell Th1 nTPM: 684.6
Samples: 4
Max nTPM: 870.5
Min nTPM: 440.0
RHH5210_R3581
820.7
RHH5302_R3668
870.5
RHH5238_R3610
440.0
RHH5267_R3639
607.0
Memory CD4 T-cell Th1/Th17 nTPM: 764.6
Samples: 4
Max nTPM: 1130.6
Min nTPM: 342.9
RHH5303_R3669
1130.6
RHH5211_R3582
1011.2
RHH5239_R3611
342.9
RHH5268_R3640
573.5
Memory CD4 T-cell Th17 nTPM: 593.5
Samples: 4
Max nTPM: 867.7
Min nTPM: 451.2
RHH5304_R3670
587.1
RHH5212_R3583
867.7
RHH5240_R3612
468.1
RHH5269_R3641
451.2
Memory CD4 T-cell Th2 nTPM: 856.3
Samples: 4
Max nTPM: 1139.1
Min nTPM: 656.3
RHH5305_R3671
759.9
RHH5213_R3584
870.0
RHH5241_R3613
1139.1
RHH5270_R3642
656.3
Naive CD4 T-cell nTPM: 681.7
Samples: 4
Max nTPM: 873.0
Min nTPM: 557.2
RHH5306_R3672
677.4
RHH5214_R3585
873.0
RHH5242_R3614
619.0
RHH5271_R3643
557.2
Naive CD8 T-cell nTPM: 679.7
Samples: 4
Max nTPM: 953.8
Min nTPM: 355.6
RHH5201_R3572
953.8
RHH5229_R3601
355.6
RHH5258_R3630
823.9
RHH5287_R3659
585.6
Non-Vd2 gdTCR nTPM: 889.0
Samples: 4
Max nTPM: 1190.1
Min nTPM: 502.9
RHH5235_R3607
502.9
RHH5264_R3636
1190.1
RHH5207_R3578
1012.4
RHH5299_R3665
850.7
T-reg nTPM: 819.6
Samples: 4
Max nTPM: 1172.5
Min nTPM: 568.2
RHH5301_R3667
840.1
RHH5237_R3609
1172.5
RHH5266_R3638
568.2
RHH5209_R3580
697.7
Terminal effector memory CD4 T-cell nTPM: 756.6
Samples: 2
Max nTPM: 959.1
Min nTPM: 554.0
RHH5243_R3615
554.0
RHH5272_R3644
959.1
Terminal effector memory CD8 T-cell nTPM: 951.7
Samples: 4
Max nTPM: 1207.9
Min nTPM: 643.0
RHH5232_R3604
986.7
RHH5204_R3575
1207.9
RHH5261_R3633
643.0
RHH5296_R3662
969.1
Vd2 gdTCR nTPM: 873.1
Samples: 4
Max nTPM: 1175.8
Min nTPM: 628.1
RHH5234_R3606
854.7
RHH5206_R3577
1175.8
RHH5263_R3635
628.1
RHH5298_R3664
833.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.