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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
5692.7
nTPM
Monaco:
1183.8
nTPM
Schmiedel:
973.7
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
5692.7
HPA sample
nTPM
gdT-cell nTPM: 2931.4
Samples: 6
Max nTPM: 3742.3
Min nTPM: 2298.5
P10809_1007
3742.3
P10809_1022
2336.6
P10809_1041
2933.0
P10809_1060
2298.5
P10809_1077
3330.6
P10809_1098
2947.3
MAIT T-cell nTPM: 4277.6
Samples: 6
Max nTPM: 5056.9
Min nTPM: 3866.8
P10809_1006
3929.7
P10809_1024
4391.5
P10809_1043
3866.8
P10809_1062
4206.8
P10809_1083
4213.8
P10809_1097
5056.9
Memory CD4 T-cell nTPM: 4518.5
Samples: 6
Max nTPM: 5334.5
Min nTPM: 3754.5
P10809_1014
5334.5
P10809_1026
4423.1
P10809_1045
4589.4
P10809_1064
3754.5
P10809_1086
4305.8
P10809_1113
4703.8
Memory CD8 T-cell nTPM: 3592.9
Samples: 5
Max nTPM: 3765.8
Min nTPM: 3174.5
P10809_1012
3714.0
P10809_1027
3593.3
P10809_1046
3765.8
P10809_1065
3174.5
P10809_1111
3716.7
Naive CD4 T-cell nTPM: 5692.7
Samples: 6
Max nTPM: 7182.1
Min nTPM: 4883.0
P10809_1015
7182.1
P10809_1030
5759.1
P10809_1049
5106.0
P10809_1068
5670.1
P10809_1085
4883.0
P10809_1112
5556.0
Naive CD8 T-cell nTPM: 4760.1
Samples: 6
Max nTPM: 7443.0
Min nTPM: 3649.3
P10809_1016
7443.0
P10809_1031
4677.1
P10809_1050
4334.6
P10809_1069
3799.2
P10809_1087
3649.3
P10809_1110
4657.3
T-reg nTPM: 3067.5
Samples: 6
Max nTPM: 3561.0
Min nTPM: 2585.8
P10809_1018
2905.4
P10809_1037
3304.6
P10809_1056
2585.8
P10809_1075
3055.3
P10809_1094
3561.0
P10809_1106
2992.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
1183.8
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 780.6
Samples: 4
Max nTPM: 1136.1
Min nTPM: 385.6
RHH5202_R3573
385.6
RHH5230_R3602
959.6
RHH5259_R3631
1136.1
RHH5288_R3660
640.9
Effector memory CD8 T-cell nTPM: 342.5
Samples: 4
Max nTPM: 616.8
Min nTPM: 182.9
RHH5203_R3574
289.8
RHH5231_R3603
280.3
RHH5260_R3632
616.8
RHH5289_R3661
182.9
MAIT T-cell nTPM: 642.9
Samples: 4
Max nTPM: 745.6
Min nTPM: 447.5
RHH5233_R3605
447.5
RHH5205_R3576
745.6
RHH5262_R3634
721.7
RHH5297_R3663
656.6
Memory CD4 T-cell TFH nTPM: 553.6
Samples: 4
Max nTPM: 649.2
Min nTPM: 449.4
RHH5300_R3666
573.1
RHH5236_R3608
649.2
RHH5265_R3637
542.6
RHH5208_R3579
449.4
Memory CD4 T-cell Th1 nTPM: 1025.7
Samples: 4
Max nTPM: 1591.7
Min nTPM: 473.6
RHH5210_R3581
473.6
RHH5302_R3668
1045.5
RHH5238_R3610
1591.7
RHH5267_R3639
991.9
Memory CD4 T-cell Th1/Th17 nTPM: 839.7
Samples: 4
Max nTPM: 1148.2
Min nTPM: 445.0
RHH5303_R3669
630.1
RHH5211_R3582
445.0
RHH5239_R3611
1148.2
RHH5268_R3640
1135.3
Memory CD4 T-cell Th17 nTPM: 823.2
Samples: 4
Max nTPM: 1132.6
Min nTPM: 554.2
RHH5304_R3670
1132.6
RHH5212_R3583
554.2
RHH5240_R3612
852.8
RHH5269_R3641
753.2
Memory CD4 T-cell Th2 nTPM: 858.5
Samples: 4
Max nTPM: 1281.1
Min nTPM: 660.0
RHH5305_R3671
1281.1
RHH5213_R3584
660.0
RHH5241_R3613
736.9
RHH5270_R3642
756.0
Naive CD4 T-cell nTPM: 1183.8
Samples: 4
Max nTPM: 1457.6
Min nTPM: 878.5
RHH5306_R3672
1457.6
RHH5214_R3585
1210.8
RHH5242_R3614
878.5
RHH5271_R3643
1188.2
Naive CD8 T-cell nTPM: 979.3
Samples: 4
Max nTPM: 1432.0
Min nTPM: 535.4
RHH5201_R3572
535.4
RHH5229_R3601
1432.0
RHH5258_R3630
739.2
RHH5287_R3659
1210.7
Non-Vd2 gdTCR nTPM: 457.1
Samples: 4
Max nTPM: 657.8
Min nTPM: 343.2
RHH5235_R3607
657.8
RHH5264_R3636
350.3
RHH5207_R3578
343.2
RHH5299_R3665
477.2
T-reg nTPM: 711.4
Samples: 4
Max nTPM: 849.7
Min nTPM: 413.9
RHH5301_R3667
790.9
RHH5237_R3609
413.9
RHH5266_R3638
849.7
RHH5209_R3580
791.0
Terminal effector memory CD4 T-cell nTPM: 518.8
Samples: 2
Max nTPM: 619.6
Min nTPM: 417.9
RHH5243_R3615
619.6
RHH5272_R3644
417.9
Terminal effector memory CD8 T-cell nTPM: 621.6
Samples: 4
Max nTPM: 1000.8
Min nTPM: 281.3
RHH5232_R3604
281.3
RHH5204_R3575
1000.8
RHH5261_R3633
768.3
RHH5296_R3662
436.0
Vd2 gdTCR nTPM: 950.1
Samples: 4
Max nTPM: 1361.1
Min nTPM: 615.0
RHH5234_R3606
615.0
RHH5206_R3577
1361.1
RHH5263_R3635
886.5
RHH5298_R3664
937.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.