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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
230.8
nTPM
Monaco:
98.5
nTPM
Schmiedel:
143.8
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
230.8
HPA sample
nTPM
gdT-cell nTPM: 144.5
Samples: 6
Max nTPM: 204.7
Min nTPM: 94.3
P10809_1007
126.7
P10809_1022
94.3
P10809_1041
116.3
P10809_1060
169.4
P10809_1077
204.7
P10809_1098
155.6
MAIT T-cell nTPM: 147.8
Samples: 6
Max nTPM: 180.3
Min nTPM: 98.3
P10809_1006
98.3
P10809_1024
149.0
P10809_1043
125.0
P10809_1062
153.9
P10809_1083
180.0
P10809_1097
180.3
Memory CD4 T-cell nTPM: 194.0
Samples: 6
Max nTPM: 255.2
Min nTPM: 135.3
P10809_1014
180.3
P10809_1026
147.8
P10809_1045
135.3
P10809_1064
224.1
P10809_1086
255.2
P10809_1113
221.5
Memory CD8 T-cell nTPM: 168.8
Samples: 5
Max nTPM: 203.6
Min nTPM: 114.8
P10809_1012
114.8
P10809_1027
194.7
P10809_1046
136.9
P10809_1065
203.6
P10809_1111
194.1
Naive CD4 T-cell nTPM: 158.3
Samples: 6
Max nTPM: 179.7
Min nTPM: 124.0
P10809_1015
157.9
P10809_1030
143.0
P10809_1049
124.0
P10809_1068
171.0
P10809_1085
179.7
P10809_1112
173.9
Naive CD8 T-cell nTPM: 189.6
Samples: 6
Max nTPM: 252.5
Min nTPM: 155.6
P10809_1016
171.2
P10809_1031
193.6
P10809_1050
155.6
P10809_1069
201.6
P10809_1087
252.5
P10809_1110
162.8
T-reg nTPM: 230.8
Samples: 6
Max nTPM: 290.3
Min nTPM: 183.3
P10809_1018
186.1
P10809_1037
241.0
P10809_1056
183.3
P10809_1075
290.3
P10809_1094
228.9
P10809_1106
255.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
98.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 84.4
Samples: 4
Max nTPM: 104.8
Min nTPM: 76.8
RHH5202_R3573
76.8
RHH5230_R3602
76.9
RHH5259_R3631
104.8
RHH5288_R3660
79.0
Effector memory CD8 T-cell nTPM: 71.6
Samples: 4
Max nTPM: 83.3
Min nTPM: 52.3
RHH5203_R3574
77.3
RHH5231_R3603
73.5
RHH5260_R3632
83.3
RHH5289_R3661
52.3
MAIT T-cell nTPM: 64.1
Samples: 4
Max nTPM: 81.0
Min nTPM: 45.8
RHH5233_R3605
64.7
RHH5205_R3576
81.0
RHH5262_R3634
64.7
RHH5297_R3663
45.8
Memory CD4 T-cell TFH nTPM: 76.2
Samples: 4
Max nTPM: 86.4
Min nTPM: 66.7
RHH5300_R3666
66.7
RHH5236_R3608
83.0
RHH5265_R3637
68.6
RHH5208_R3579
86.4
Memory CD4 T-cell Th1 nTPM: 85.4
Samples: 4
Max nTPM: 90.3
Min nTPM: 79.1
RHH5210_R3581
79.1
RHH5302_R3668
89.3
RHH5238_R3610
82.8
RHH5267_R3639
90.3
Memory CD4 T-cell Th1/Th17 nTPM: 86.2
Samples: 4
Max nTPM: 94.1
Min nTPM: 78.1
RHH5303_R3669
78.1
RHH5211_R3582
94.1
RHH5239_R3611
84.9
RHH5268_R3640
87.7
Memory CD4 T-cell Th17 nTPM: 83.1
Samples: 4
Max nTPM: 90.2
Min nTPM: 74.4
RHH5304_R3670
90.2
RHH5212_R3583
80.6
RHH5240_R3612
87.0
RHH5269_R3641
74.4
Memory CD4 T-cell Th2 nTPM: 85.1
Samples: 4
Max nTPM: 103.3
Min nTPM: 65.1
RHH5305_R3671
103.3
RHH5213_R3584
92.9
RHH5241_R3613
79.2
RHH5270_R3642
65.1
Naive CD4 T-cell nTPM: 80.7
Samples: 4
Max nTPM: 117.1
Min nTPM: 63.6
RHH5306_R3672
78.5
RHH5214_R3585
117.1
RHH5242_R3614
63.7
RHH5271_R3643
63.6
Naive CD8 T-cell nTPM: 80.3
Samples: 4
Max nTPM: 116.2
Min nTPM: 60.4
RHH5201_R3572
73.0
RHH5229_R3601
116.2
RHH5258_R3630
60.4
RHH5287_R3659
71.5
Non-Vd2 gdTCR nTPM: 81.5
Samples: 4
Max nTPM: 107.0
Min nTPM: 60.4
RHH5235_R3607
83.3
RHH5264_R3636
60.4
RHH5207_R3578
107.0
RHH5299_R3665
75.2
T-reg nTPM: 82.8
Samples: 4
Max nTPM: 100.7
Min nTPM: 71.4
RHH5301_R3667
78.4
RHH5237_R3609
71.4
RHH5266_R3638
80.6
RHH5209_R3580
100.7
Terminal effector memory CD4 T-cell nTPM: 69.0
Samples: 2
Max nTPM: 89.4
Min nTPM: 48.5
RHH5243_R3615
89.4
RHH5272_R3644
48.5
Terminal effector memory CD8 T-cell nTPM: 97.5
Samples: 4
Max nTPM: 168.8
Min nTPM: 61.8
RHH5232_R3604
61.8
RHH5204_R3575
168.8
RHH5261_R3633
88.7
RHH5296_R3662
70.5
Vd2 gdTCR nTPM: 98.5
Samples: 4
Max nTPM: 159.7
Min nTPM: 51.1
RHH5234_R3606
71.4
RHH5206_R3577
159.7
RHH5263_R3635
111.8
RHH5298_R3664
51.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
