HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:10.2 nTPM
HPA Brain:41.1 nTPM
GTEx:10.2 nTPM
FANTOM5:71.9 Scaled Tags Per Million
Pig:44.0 nTPM
Mouse:34.9 nTPM
Allen mouse:10.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA029321
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 41.1
Sample id Sample description nTPM
Hippocampus
nTPM: 40.5
2529 Female, age 94, left hemisphere 45.2
1898 Male, age 80, left hemisphere 42.4
2148 Female, age 91, left hemisphere 42.0
2621 Female, age 67, right hemisphere 38.8
1911 Female, age 85, right hemisphere 37.5
1855 Male, age 76, left hemisphere 36.8
Dentate gyrus
nTPM: 39.0
2528 Male, age 74, both hemispheres 43.9
2010 Male, age 76, both hemispheres 39.1
2530 Female, age 94, left hemisphere 38.6
2246 Female, age 85, both hemispheres 38.0
2531 Female, age 67, both hemispheres 38.0
1927 Female, age 91, both hemispheres 36.4
Entorhinal gyrus
nTPM: 40.8
2117 Female, age 91, right hemisphere 48.3
2764 Male, age 80, right hemisphere 42.7
1787 Male, age 76, left hemisphere 41.1
1938 Female, age 85, left hemisphere 40.2
2686 Male, age 75, right hemisphere 38.6
2613 Female, age 94, left hemisphere 34.2
Hippocampus, CA1
nTPM: 41.1
2527 Male, age 74, both hemispheres 45.0
2749 Male, age 80, left hemisphere 41.4
1873 Female, age 85, both hemispheres 41.2
2082 Female, age 91, right hemisphere 41.2
2045 Male, age 76, both hemispheres 36.6
Hippocampus, CA2
nTPM: 39.8
2249 Male, age 74, both hemispheres 42.5
1963 Male, age 80, left hemisphere 41.9
2113 Female, age 91, right hemisphere 40.5
1940 Female, age 85, left hemisphere 39.6
2437 Female, age 94, left hemisphere 38.8
1892 Male, age 76, both hemispheres 35.5
Hippocampus, CA3
nTPM: 39.9
2436 Male, age 74, both hemispheres 47.5
1891 Female, age 85, both hemispheres 40.8
2137 Male, age 80, left hemisphere 38.5
2861 Female, age 67, both hemispheres 37.8
1867 Male, age 76, both hemispheres 37.6
2620 Female, age 94, left hemisphere 37.5
Parahippocampal cortex
nTPM: 39.5
1850 Male, age 80, both hemispheres 43.4
2250 Female, age 67, right hemisphere 41.5
2622 Female, age 67, right hemisphere 40.3
2245 Female, age 91, both hemispheres 39.1
2692 Male, age 74, both hemispheres 39.0
2018 Male, age 76, both hemispheres 38.9
1990 Female, age 91, right hemisphere 38.8
2532 Female, age 72, left hemisphere 38.8
1933 Female, age 85, both hemispheres 38.7
2693 Female, age 94, both hemispheres 36.8
Perirhinal gyrus
nTPM: 40.9
1794 Male, age 80, right hemisphere 44.0
1847 Female, age 91, left hemisphere 42.0
1841 Female, age 85, right hemisphere 41.7
2521 Female, age 94, right hemisphere 38.4
2848 Male, age 76, right hemisphere 38.2
Subiculum
nTPM: 39.6
2729 Female, age 91, right hemisphere 42.3
2619 Male, age 74, both hemispheres 41.5
1977 Female, age 85, both hemispheres 39.1
2438 Female, age 94, left hemisphere 39.1
1901 Male, age 80, both hemispheres 38.5
2042 Male, age 76, both hemispheres 37.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 10.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 10.2
Samples: 197

Max nTPM: 21.1
Min nTPM: 4.0
Std nTPM: 3.2
Median nTPM: 9.9
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 21.1
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 20.0
GTEX-QVJO-0011-R1A-SM-2S1QI 60-69 years, female 19.5
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 18.3
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 17.1
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 17.0
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 16.9
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 16.8
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 16.5
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 16.5
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 16.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 71.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 71.9
FF:10153-102I9 76 years, female 82.6
FF:10169-103B7 60 years, female 61.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 44.0
Pig sample Sample description nTPM
Subiculum
nTPM: 38.5
Samples: 4

Max nTPM: 49.8
Min nTPM: 32.0
Sample A Female 49.8
Sample B Female 35.8
Sample C Male 36.2
Sample D Male 32.0
Dorsal hippocampus
nTPM: 44.0
Samples: 4

Max nTPM: 56.3
Min nTPM: 32.2
Sample A Female 56.3
Sample B Female 46.0
Sample C Male 41.5
Sample D Male 32.2
Entorhinal cortex
nTPM: 34.6
Samples: 4

Max nTPM: 41.2
Min nTPM: 27.9
Sample A Female 41.2
Sample B Female 34.9
Sample C Male 34.4
Sample D Male 27.9
Ventral hippocampus
nTPM: 42.6
Samples: 4

Max nTPM: 51.1
Min nTPM: 30.8
Sample A Female 44.2
Sample B Female 30.8
Sample C Male 51.1
Sample D Male 44.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 34.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 34.8
Samples: 4

Max nTPM: 42.9
Min nTPM: 30.2
Sample A Male 33.6
Sample B Male 30.2
Sample C Female 32.4
Sample D Female 42.9
Hippocampal formation
nTPM: 34.9
Samples: 4

Max nTPM: 42.9
Min nTPM: 27.9
Sample A Male 27.9
Sample B Male 39.1
Sample C Female 42.9
Sample D Female 29.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 10.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 10.1
68844510 Antisense, RP_050222_01_G11, Mouse strain C57BL/6J (56 days, male) 10.1

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