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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
33.0
nTPM
HPA Brain:
76.9
nTPM
GTEx:
33.0
nTPM
FANTOM5:
138.6
Scaled Tags Per Million
Pig:
93.5
nTPM
Mouse:
100.5
nTPM
Allen mouse:
1.4
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max nTPM
76.9
Sample id
Sample description
nTPM
Amygdala nTPM: 73.5
2695
Female, age 67, right hemisphere
92.1
2514
Male, age 75, right hemisphere
78.4
2814
Male, age 76, right hemisphere
67.2
2517
Female, age 94, left hemisphere
66.0
1987
Female, age 91, left hemisphere
63.8
Basal amygdala nTPM: 68.0
2609
Male, age 75, right hemisphere
102.7
2243
Female, age 91, right hemisphere
67.1
2827
Female, age 67, right hemisphere
60.5
2110
Male, age 80, left hemisphere
60.1
1955
Male, age 76, both hemispheres
59.5
2685
Female, age 94, left hemisphere
58.2
Central amygdala nTPM: 70.0
2515
Male, age 75, right hemisphere
97.3
1905
Male, age 76, both hemispheres
67.3
2239
Male, age 80, left hemisphere
66.2
2826
Female, age 94, left hemisphere
63.3
2701
Female, age 91, right hemisphere
55.8
Corticomedial amygdala nTPM: 65.8
2428
Male, age 75, right hemisphere
94.0
2829
Male, age 80, left hemisphere
68.4
2429
Female, age 94, left hemisphere
58.9
2535
Female, age 67, right hemisphere
58.9
2240
Male, age 76, both hemispheres
57.3
2242
Female, age 91, right hemisphere
57.2
Lateral amygdala nTPM: 76.9
2256
Male, age 80, left hemisphere
94.2
2516
Male, age 75, right hemisphere
90.2
2830
Female, age 67, right hemisphere
82.9
2255
Female, age 91, right hemisphere
68.9
1883
Male, age 76, both hemispheres
64.1
2534
Female, age 94, left hemisphere
61.1
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
33.0
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 33.0
Samples: 152
Max nTPM: 80.3
Min nTPM: 0.1
Std nTPM: 16.6
Median nTPM: 29.6
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
80.3
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
74.3
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
72.7
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
66.1
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
66.1
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
62.7
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
62.0
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
61.3
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
61.1
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
61.1
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
60.8
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
59.7
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
59.2
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
58.4
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
58.2
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
56.2
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
55.6
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
54.0
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
53.6
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
53.4
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
53.3
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
53.2
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
51.8
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
51.5
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
51.4
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
51.3
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
51.1
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
50.5
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
50.3
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
49.9
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
49.2
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
49.1
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
48.4
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
47.3
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
46.3
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
46.2
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
46.0
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
45.8
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
45.0
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
44.9
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
44.7
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
44.5
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
43.8
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
41.7
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
40.5
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
39.8
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
39.3
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
39.1
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
39.1
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
38.8
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
38.8
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
38.4
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
37.5
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
37.5
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
37.3
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
37.0
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
37.0
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
37.0
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
36.4
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
36.4
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
36.3
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
35.2
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
35.2
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
35.0
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
34.9
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
34.3
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
33.5
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
33.4
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
32.4
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
32.2
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
31.8
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
30.9
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
30.8
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
30.3
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
30.3
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
29.9
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
29.4
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
29.1
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
29.1
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
29.1
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
29.1
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
29.0
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
28.9
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
28.9
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
28.8
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
28.3
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
27.4
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
27.2
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
27.1
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
26.9
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
26.7
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
26.7
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
26.6
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
26.6
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
26.5
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
26.2
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
25.5
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
25.4
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
25.4
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
25.4
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
25.2
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
24.9
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
23.8
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
23.8
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
23.8
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
23.7
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
23.4
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
23.4
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
23.3
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
23.2
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
22.8
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
22.4
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
22.2
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
22.1
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
21.7
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
21.0
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
20.2
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
19.3
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
19.2
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
19.1
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
19.1
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
18.9
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
17.8
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
17.1
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
16.7
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
15.7
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
15.5
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
15.3
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
14.6
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
14.4
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
13.8
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
13.5
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
13.3
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
13.1
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
13.0
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
12.7
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
12.4
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
12.3
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
11.2
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
11.2
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
11.1
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
10.0
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
9.2
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
9.1
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
7.5
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
7.4
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
7.4
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
6.4
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
5.8
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
5.2
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
2.4
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
0.1
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
100.5
Mouse sample
Sample description
nTPM
Amygdala nTPM: 100.5
Samples: 4
Max nTPM: 118.7
Min nTPM: 89.9
Sample A
Male
89.9
Sample B
Male
93.2
Sample C
Female
118.7
Sample D
Female
100.3
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.