HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:17.5 nTPM
HPA Brain:67.4 nTPM
GTEx:17.5 nTPM
FANTOM5:143.4 Scaled Tags Per Million
Pig:104.5 nTPM
Mouse:110.5 nTPM
Allen mouse:1.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA015473
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 67.4
Sample id Sample description nTPM
Hippocampus
nTPM: 58.5
2529 Female, age 94, left hemisphere 65.6
2148 Female, age 91, left hemisphere 58.4
2621 Female, age 67, right hemisphere 58.1
1898 Male, age 80, left hemisphere 57.1
1855 Male, age 76, left hemisphere 56.6
1911 Female, age 85, right hemisphere 55.1
Dentate gyrus
nTPM: 50.4
2528 Male, age 74, both hemispheres 61.9
2246 Female, age 85, both hemispheres 57.6
2530 Female, age 94, left hemisphere 52.0
2531 Female, age 67, both hemispheres 48.2
2010 Male, age 76, both hemispheres 43.6
1927 Female, age 91, both hemispheres 39.4
Entorhinal gyrus
nTPM: 67.4
2686 Male, age 75, right hemisphere 84.2
2117 Female, age 91, right hemisphere 82.7
1938 Female, age 85, left hemisphere 64.2
2764 Male, age 80, right hemisphere 60.8
2613 Female, age 94, left hemisphere 58.0
1787 Male, age 76, left hemisphere 54.7
Hippocampus, CA1
nTPM: 50.0
2527 Male, age 74, both hemispheres 68.1
1873 Female, age 85, both hemispheres 51.3
2082 Female, age 91, right hemisphere 50.7
2749 Male, age 80, left hemisphere 42.9
2045 Male, age 76, both hemispheres 37.1
Hippocampus, CA2
nTPM: 52.5
2437 Female, age 94, left hemisphere 57.7
1940 Female, age 85, left hemisphere 54.3
2113 Female, age 91, right hemisphere 54.2
1963 Male, age 80, left hemisphere 52.8
2249 Male, age 74, both hemispheres 51.9
1892 Male, age 76, both hemispheres 43.9
Hippocampus, CA3
nTPM: 51.7
2861 Female, age 67, both hemispheres 73.9
2620 Female, age 94, left hemisphere 55.2
2436 Male, age 74, both hemispheres 50.1
1891 Female, age 85, both hemispheres 48.2
1867 Male, age 76, both hemispheres 42.7
2137 Male, age 80, left hemisphere 39.9
Parahippocampal cortex
nTPM: 61.0
2692 Male, age 74, both hemispheres 88.4
2622 Female, age 67, right hemisphere 85.4
1933 Female, age 85, both hemispheres 64.9
2250 Female, age 67, right hemisphere 62.3
2245 Female, age 91, both hemispheres 57.5
1990 Female, age 91, right hemisphere 55.8
2693 Female, age 94, both hemispheres 55.6
1850 Male, age 80, both hemispheres 55.4
2018 Male, age 76, both hemispheres 42.9
2532 Female, age 72, left hemisphere 41.6
Perirhinal gyrus
nTPM: 50.0
1847 Female, age 91, left hemisphere 55.2
2521 Female, age 94, right hemisphere 51.2
1794 Male, age 80, right hemisphere 49.6
2848 Male, age 76, right hemisphere 48.6
1841 Female, age 85, right hemisphere 45.7
Subiculum
nTPM: 56.0
2619 Male, age 74, both hemispheres 80.3
2729 Female, age 91, right hemisphere 66.7
2438 Female, age 94, left hemisphere 56.7
1977 Female, age 85, both hemispheres 45.6
1901 Male, age 80, both hemispheres 44.6
2042 Male, age 76, both hemispheres 41.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 17.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 17.5
Samples: 197

Max nTPM: 47.6
Min nTPM: 0.4
Std nTPM: 9.3
Median nTPM: 16.2
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 47.6
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 42.5
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 41.6
GTEX-17JCI-0011-R1b-SM-718A3 60-69 years, female 41.4
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 40.5
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 40.3
GTEX-ZDXO-0011-R1a-SM-4WKF4 60-69 years, male 39.9
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 38.6
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 36.6
GTEX-14PQA-0011-R1b-SM-6EU1G 50-59 years, female 35.7
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 35.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 143.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 143.4
FF:10153-102I9 76 years, female 155.0
FF:10169-103B7 60 years, female 131.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 104.5
Pig sample Sample description nTPM
Subiculum
nTPM: 83.4
Samples: 4

Max nTPM: 106.3
Min nTPM: 71.5
Sample A Female 106.3
Sample B Female 78.6
Sample C Male 71.5
Sample D Male 77.3
Dorsal hippocampus
nTPM: 78.9
Samples: 4

Max nTPM: 93.7
Min nTPM: 65.2
Sample A Female 93.7
Sample B Female 65.2
Sample C Male 76.8
Sample D Male 80.0
Entorhinal cortex
nTPM: 104.5
Samples: 4

Max nTPM: 120.7
Min nTPM: 92.8
Sample A Female 98.0
Sample B Female 106.6
Sample C Male 120.7
Sample D Male 92.8
Ventral hippocampus
nTPM: 74.3
Samples: 4

Max nTPM: 84.0
Min nTPM: 60.3
Sample A Female 68.9
Sample B Female 60.3
Sample C Male 84.0
Sample D Male 83.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 110.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 110.5
Samples: 4

Max nTPM: 120.1
Min nTPM: 104.4
Sample A Male 120.1
Sample B Male 107.0
Sample C Female 110.6
Sample D Female 104.4
Hippocampal formation
nTPM: 92.2
Samples: 4

Max nTPM: 110.8
Min nTPM: 76.5
Sample A Male 110.8
Sample B Male 89.3
Sample C Female 76.5
Sample D Female 92.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.9
70302051 Antisense, RP_050607_03_D12, Mouse strain C57BL/6J (56 days, male) 1.9

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