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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
16.2
nTPM
Monaco:
23.3
nTPM
Schmiedel:
16.1
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
16.2
HPA sample
nTPM
gdT-cell nTPM: 8.2
Samples: 6
Max nTPM: 11.6
Min nTPM: 5.5
P10809_1007
5.5
P10809_1022
11.6
P10809_1041
9.0
P10809_1060
8.3
P10809_1077
7.2
P10809_1098
7.6
MAIT T-cell nTPM: 8.5
Samples: 6
Max nTPM: 14.0
Min nTPM: 5.7
P10809_1006
5.9
P10809_1024
10.2
P10809_1043
5.7
P10809_1062
8.7
P10809_1083
6.5
P10809_1097
14.0
Memory CD4 T-cell nTPM: 6.9
Samples: 6
Max nTPM: 10.4
Min nTPM: 3.3
P10809_1014
8.0
P10809_1026
3.3
P10809_1045
6.3
P10809_1064
6.9
P10809_1086
6.7
P10809_1113
10.4
Memory CD8 T-cell nTPM: 8.4
Samples: 5
Max nTPM: 14.2
Min nTPM: 3.1
P10809_1012
3.1
P10809_1027
14.2
P10809_1046
8.6
P10809_1065
6.0
P10809_1111
10.3
Naive CD4 T-cell nTPM: 16.2
Samples: 6
Max nTPM: 20.9
Min nTPM: 11.2
P10809_1015
12.3
P10809_1030
11.2
P10809_1049
20.1
P10809_1068
19.6
P10809_1085
13.2
P10809_1112
20.9
Naive CD8 T-cell nTPM: 10.3
Samples: 6
Max nTPM: 17.3
Min nTPM: 6.0
P10809_1016
10.5
P10809_1031
10.2
P10809_1050
8.5
P10809_1069
9.4
P10809_1087
6.0
P10809_1110
17.3
T-reg nTPM: 7.9
Samples: 6
Max nTPM: 17.6
Min nTPM: 2.1
P10809_1018
3.6
P10809_1037
3.5
P10809_1056
13.6
P10809_1075
2.1
P10809_1094
17.6
P10809_1106
6.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
23.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 9.7
Samples: 4
Max nTPM: 14.9
Min nTPM: 5.9
RHH5202_R3573
9.4
RHH5230_R3602
5.9
RHH5259_R3631
8.7
RHH5288_R3660
14.9
Effector memory CD8 T-cell nTPM: 11.3
Samples: 4
Max nTPM: 19.7
Min nTPM: 3.5
RHH5203_R3574
6.9
RHH5231_R3603
19.7
RHH5260_R3632
3.5
RHH5289_R3661
14.9
MAIT T-cell nTPM: 19.3
Samples: 4
Max nTPM: 28.3
Min nTPM: 11.4
RHH5233_R3605
28.3
RHH5205_R3576
11.4
RHH5262_R3634
18.1
RHH5297_R3663
19.4
Memory CD4 T-cell TFH nTPM: 12.2
Samples: 4
Max nTPM: 18.7
Min nTPM: 5.6
RHH5300_R3666
14.1
RHH5236_R3608
10.3
RHH5265_R3637
18.7
RHH5208_R3579
5.6
Memory CD4 T-cell Th1 nTPM: 8.5
Samples: 4
Max nTPM: 14.2
Min nTPM: 0.9
RHH5210_R3581
9.9
RHH5302_R3668
14.2
RHH5238_R3610
0.9
RHH5267_R3639
9.0
Memory CD4 T-cell Th1/Th17 nTPM: 10.0
Samples: 4
Max nTPM: 14.9
Min nTPM: 6.0
RHH5303_R3669
14.9
RHH5211_R3582
6.0
RHH5239_R3611
12.3
RHH5268_R3640
6.8
Memory CD4 T-cell Th17 nTPM: 9.0
Samples: 4
Max nTPM: 10.9
Min nTPM: 5.2
RHH5304_R3670
9.8
RHH5212_R3583
10.0
RHH5240_R3612
5.2
RHH5269_R3641
10.9
Memory CD4 T-cell Th2 nTPM: 9.9
Samples: 4
Max nTPM: 12.9
Min nTPM: 4.8
RHH5305_R3671
12.9
RHH5213_R3584
4.8
RHH5241_R3613
8.8
RHH5270_R3642
12.9
Naive CD4 T-cell nTPM: 23.3
Samples: 4
Max nTPM: 36.9
Min nTPM: 16.2
RHH5306_R3672
36.9
RHH5214_R3585
17.6
RHH5242_R3614
16.2
RHH5271_R3643
22.6
Naive CD8 T-cell nTPM: 13.8
Samples: 4
Max nTPM: 21.7
Min nTPM: 9.8
RHH5201_R3572
9.9
RHH5229_R3601
9.8
RHH5258_R3630
21.7
RHH5287_R3659
13.8
Non-Vd2 gdTCR nTPM: 8.9
Samples: 4
Max nTPM: 13.8
Min nTPM: 6.7
RHH5235_R3607
6.7
RHH5264_R3636
13.8
RHH5207_R3578
8.2
RHH5299_R3665
6.8
T-reg nTPM: 11.1
Samples: 4
Max nTPM: 14.4
Min nTPM: 7.4
RHH5301_R3667
14.4
RHH5237_R3609
8.9
RHH5266_R3638
7.4
RHH5209_R3580
13.7
Terminal effector memory CD4 T-cell nTPM: 13.0
Samples: 2
Max nTPM: 17.4
Min nTPM: 8.6
RHH5243_R3615
8.6
RHH5272_R3644
17.4
Terminal effector memory CD8 T-cell nTPM: 7.9
Samples: 4
Max nTPM: 9.7
Min nTPM: 4.6
RHH5232_R3604
9.7
RHH5204_R3575
8.7
RHH5261_R3633
4.6
RHH5296_R3662
8.6
Vd2 gdTCR nTPM: 11.0
Samples: 4
Max nTPM: 19.1
Min nTPM: 6.4
RHH5234_R3606
19.1
RHH5206_R3577
8.0
RHH5263_R3635
6.4
RHH5298_R3664
10.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
