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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
59.5
nTPM
Monaco:
328.1
nTPM
Schmiedel:
180.1
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
59.5
HPA sample
nTPM
gdT-cell nTPM: 52.9
Samples: 6
Max nTPM: 66.7
Min nTPM: 44.1
P10809_1007
44.6
P10809_1022
58.0
P10809_1041
66.7
P10809_1060
53.5
P10809_1077
50.7
P10809_1098
44.1
MAIT T-cell nTPM: 59.5
Samples: 6
Max nTPM: 80.1
Min nTPM: 46.4
P10809_1006
48.5
P10809_1024
80.1
P10809_1043
63.5
P10809_1062
46.4
P10809_1083
59.1
P10809_1097
59.5
Memory CD4 T-cell nTPM: 22.3
Samples: 6
Max nTPM: 31.0
Min nTPM: 15.2
P10809_1014
15.2
P10809_1026
18.7
P10809_1045
21.3
P10809_1064
27.2
P10809_1086
31.0
P10809_1113
20.1
Memory CD8 T-cell nTPM: 38.4
Samples: 5
Max nTPM: 47.4
Min nTPM: 25.9
P10809_1012
25.9
P10809_1027
33.9
P10809_1046
47.4
P10809_1065
43.6
P10809_1111
41.0
Naive CD4 T-cell nTPM: 17.5
Samples: 6
Max nTPM: 21.9
Min nTPM: 14.1
P10809_1015
15.5
P10809_1030
15.3
P10809_1049
14.1
P10809_1068
21.9
P10809_1085
16.9
P10809_1112
21.4
Naive CD8 T-cell nTPM: 27.7
Samples: 6
Max nTPM: 49.4
Min nTPM: 14.3
P10809_1016
14.3
P10809_1031
18.7
P10809_1050
29.4
P10809_1069
32.7
P10809_1087
49.4
P10809_1110
21.7
T-reg nTPM: 14.6
Samples: 6
Max nTPM: 18.3
Min nTPM: 11.5
P10809_1018
16.4
P10809_1037
12.0
P10809_1056
18.3
P10809_1075
11.5
P10809_1094
14.6
P10809_1106
14.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
328.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 142.0
Samples: 4
Max nTPM: 160.6
Min nTPM: 127.4
RHH5202_R3573
127.4
RHH5230_R3602
160.6
RHH5259_R3631
147.1
RHH5288_R3660
132.9
Effector memory CD8 T-cell nTPM: 248.5
Samples: 4
Max nTPM: 277.3
Min nTPM: 230.5
RHH5203_R3574
244.1
RHH5231_R3603
230.5
RHH5260_R3632
242.0
RHH5289_R3661
277.3
MAIT T-cell nTPM: 276.4
Samples: 4
Max nTPM: 311.8
Min nTPM: 255.1
RHH5233_R3605
281.6
RHH5205_R3576
311.8
RHH5262_R3634
255.1
RHH5297_R3663
257.0
Memory CD4 T-cell TFH nTPM: 103.0
Samples: 4
Max nTPM: 116.7
Min nTPM: 94.9
RHH5300_R3666
105.0
RHH5236_R3608
95.3
RHH5265_R3637
94.9
RHH5208_R3579
116.7
Memory CD4 T-cell Th1 nTPM: 124.6
Samples: 4
Max nTPM: 150.7
Min nTPM: 110.6
RHH5210_R3581
110.6
RHH5302_R3668
120.9
RHH5238_R3610
150.7
RHH5267_R3639
116.2
Memory CD4 T-cell Th1/Th17 nTPM: 151.6
Samples: 4
Max nTPM: 169.3
Min nTPM: 140.1
RHH5303_R3669
169.3
RHH5211_R3582
140.1
RHH5239_R3611
150.5
RHH5268_R3640
146.4
Memory CD4 T-cell Th17 nTPM: 131.6
Samples: 4
Max nTPM: 150.4
Min nTPM: 113.5
RHH5304_R3670
150.4
RHH5212_R3583
113.5
RHH5240_R3612
130.8
RHH5269_R3641
131.6
Memory CD4 T-cell Th2 nTPM: 99.9
Samples: 4
Max nTPM: 111.2
Min nTPM: 88.2
RHH5305_R3671
108.2
RHH5213_R3584
111.2
RHH5241_R3613
92.0
RHH5270_R3642
88.2
Naive CD4 T-cell nTPM: 112.7
Samples: 4
Max nTPM: 121.0
Min nTPM: 100.1
RHH5306_R3672
110.1
RHH5214_R3585
100.1
RHH5242_R3614
119.5
RHH5271_R3643
121.0
Naive CD8 T-cell nTPM: 109.5
Samples: 4
Max nTPM: 141.0
Min nTPM: 81.9
RHH5201_R3572
102.5
RHH5229_R3601
141.0
RHH5258_R3630
81.9
RHH5287_R3659
112.7
Non-Vd2 gdTCR nTPM: 272.9
Samples: 4
Max nTPM: 336.9
Min nTPM: 228.1
RHH5235_R3607
228.1
RHH5264_R3636
258.2
RHH5207_R3578
336.9
RHH5299_R3665
268.3
T-reg nTPM: 90.7
Samples: 4
Max nTPM: 101.6
Min nTPM: 74.1
RHH5301_R3667
101.6
RHH5237_R3609
90.3
RHH5266_R3638
74.1
RHH5209_R3580
96.8
Terminal effector memory CD4 T-cell nTPM: 328.1
Samples: 2
Max nTPM: 370.5
Min nTPM: 285.6
RHH5243_R3615
370.5
RHH5272_R3644
285.6
Terminal effector memory CD8 T-cell nTPM: 296.0
Samples: 4
Max nTPM: 334.8
Min nTPM: 267.8
RHH5232_R3604
286.6
RHH5204_R3575
267.8
RHH5261_R3633
294.8
RHH5296_R3662
334.8
Vd2 gdTCR nTPM: 276.4
Samples: 4
Max nTPM: 310.7
Min nTPM: 211.1
RHH5234_R3606
310.7
RHH5206_R3577
273.9
RHH5263_R3635
309.8
RHH5298_R3664
211.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
