HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:15.9 nTPM
HPA Brain:60.4 nTPM
GTEx:15.9 nTPM
FANTOM5:116.7 Scaled Tags Per Million
Pig:47.9 nTPM
Mouse:32.3 nTPM
Allen mouse:2.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA036325
Glial cells Medium
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 60.4
Sample id Sample description nTPM
Hippocampus
nTPM: 56.8
1898 Male, age 80, left hemisphere 63.9
2529 Female, age 94, left hemisphere 63.0
1911 Female, age 85, right hemisphere 59.9
1855 Male, age 76, left hemisphere 54.0
2621 Female, age 67, right hemisphere 51.5
2148 Female, age 91, left hemisphere 48.2
Dentate gyrus
nTPM: 54.8
2530 Female, age 94, left hemisphere 63.9
2010 Male, age 76, both hemispheres 58.0
2246 Female, age 85, both hemispheres 55.1
2528 Male, age 74, both hemispheres 53.6
1927 Female, age 91, both hemispheres 49.9
2531 Female, age 67, both hemispheres 48.6
Entorhinal gyrus
nTPM: 56.4
2117 Female, age 91, right hemisphere 67.0
1938 Female, age 85, left hemisphere 60.8
2764 Male, age 80, right hemisphere 55.4
1787 Male, age 76, left hemisphere 55.2
2686 Male, age 75, right hemisphere 52.2
2613 Female, age 94, left hemisphere 48.0
Hippocampus, CA1
nTPM: 57.4
2527 Male, age 74, both hemispheres 63.1
2749 Male, age 80, left hemisphere 61.8
1873 Female, age 85, both hemispheres 58.5
2082 Female, age 91, right hemisphere 52.7
2045 Male, age 76, both hemispheres 51.0
Hippocampus, CA2
nTPM: 56.8
2249 Male, age 74, both hemispheres 59.6
2437 Female, age 94, left hemisphere 58.0
1963 Male, age 80, left hemisphere 57.3
1892 Male, age 76, both hemispheres 55.7
1940 Female, age 85, left hemisphere 55.6
2113 Female, age 91, right hemisphere 54.6
Hippocampus, CA3
nTPM: 54.1
2436 Male, age 74, both hemispheres 61.2
1891 Female, age 85, both hemispheres 60.1
1867 Male, age 76, both hemispheres 57.5
2137 Male, age 80, left hemisphere 57.3
2861 Female, age 67, both hemispheres 45.8
2620 Female, age 94, left hemisphere 42.5
Parahippocampal cortex
nTPM: 54.1
2532 Female, age 72, left hemisphere 57.7
2018 Male, age 76, both hemispheres 57.4
1850 Male, age 80, both hemispheres 56.5
1933 Female, age 85, both hemispheres 56.2
2245 Female, age 91, both hemispheres 56.2
1990 Female, age 91, right hemisphere 55.8
2250 Female, age 67, right hemisphere 51.4
2693 Female, age 94, both hemispheres 50.9
2692 Male, age 74, both hemispheres 50.7
2622 Female, age 67, right hemisphere 48.1
Perirhinal gyrus
nTPM: 52.2
1841 Female, age 85, right hemisphere 56.1
2521 Female, age 94, right hemisphere 52.2
1847 Female, age 91, left hemisphere 51.9
1794 Male, age 80, right hemisphere 50.8
2848 Male, age 76, right hemisphere 49.7
Subiculum
nTPM: 60.4
2438 Female, age 94, left hemisphere 72.1
1901 Male, age 80, both hemispheres 63.7
2042 Male, age 76, both hemispheres 62.9
1977 Female, age 85, both hemispheres 59.4
2729 Female, age 91, right hemisphere 53.1
2619 Male, age 74, both hemispheres 51.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 15.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 15.9
Samples: 197

Max nTPM: 33.8
Min nTPM: 2.5
Std nTPM: 5.6
Median nTPM: 15.9
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 33.8
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 31.8
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 29.1
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 28.2
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 27.7
GTEX-13G51-0011-R1a-SM-5LZYR 60-69 years, male 26.8
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 26.7
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 26.3
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 25.1
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 25.0
GTEX-1H1DG-0011-R1b-SM-CKZP1 70-79 years, male 25.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 116.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 116.7
FF:10169-103B7 60 years, female 137.0
FF:10153-102I9 76 years, female 96.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 47.9
Pig sample Sample description nTPM
Subiculum
nTPM: 41.5
Samples: 4

Max nTPM: 48.0
Min nTPM: 37.0
Sample A Female 48.0
Sample B Female 41.2
Sample C Male 37.0
Sample D Male 39.9
Dorsal hippocampus
nTPM: 47.9
Samples: 4

Max nTPM: 61.7
Min nTPM: 34.9
Sample A Female 61.7
Sample B Female 43.1
Sample C Male 52.0
Sample D Male 34.9
Entorhinal cortex
nTPM: 39.8
Samples: 4

Max nTPM: 42.6
Min nTPM: 34.5
Sample A Female 40.2
Sample B Female 42.6
Sample C Male 41.8
Sample D Male 34.5
Ventral hippocampus
nTPM: 43.1
Samples: 4

Max nTPM: 50.2
Min nTPM: 37.8
Sample A Female 50.2
Sample B Female 37.8
Sample C Male 43.3
Sample D Male 41.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 32.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 26.1
Samples: 4

Max nTPM: 27.7
Min nTPM: 24.5
Sample A Male 26.5
Sample B Male 25.7
Sample C Female 27.7
Sample D Female 24.5
Hippocampal formation
nTPM: 32.3
Samples: 4

Max nTPM: 34.2
Min nTPM: 30.0
Sample A Male 30.0
Sample B Male 33.1
Sample C Female 34.2
Sample D Female 31.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.7
641544 Antisense, RP_040914_01_G04, Mouse strain C57BL/6J (56 days, male) 2.7

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