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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
274.0
nTPM
FANTOM5:
130.1
Scaled Tags Per Million
Pig:
164.4
nTPM
PONS - HPA Brain RNA-seq
Max nTPM
274.0
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 270.5
2301
Female, age 85, both hemispheres
378.4
2188
Female, age 91, both hemispheres
330.6
2090
Male, age 80, both hemispheres
240.7
1984
Male, age 76, both hemispheres
132.4
Dorsal cochlear nucleus nTPM: 232.7
2187
Female, age 91, both hemispheres
313.2
2802
Male, age 74, right hemisphere
256.6
2378
Male, age 80, both hemispheres
228.1
2370
Male, age 61, both hemispheres
208.6
2058
Male, age 76, both hemispheres
157.0
Dorsal tegmental nucleus nTPM: 220.7
2326
Male, age 74, both hemispheres
245.7
2083
Male, age 80, both hemispheres
233.4
2358
Male, age 61, both hemispheres
208.3
1936
Male, age 76, left hemisphere
195.3
Dorsolateral tegmental area nTPM: 203.2
2751
Female, age 85, both hemispheres
265.2
2654
Male, age 80, both hemispheres
259.1
2337
Male, age 61, both hemispheres
244.9
2360
Male, age 74, both hemispheres
140.1
2141
Male, age 76, both hemispheres
106.7
Kolliker-Fuse nucleus nTPM: 227.9
2793
Female, age 91, left hemisphere
351.0
2163
Male, age 80, both hemispheres
216.2
2315
Male, age 76, right hemisphere
116.5
Lateral lemniscal nuclei nTPM: 185.0
2320
Female, age 91, left hemisphere
246.9
2169
Male, age 76, both hemispheres
187.7
2036
Male, age 80, both hemispheres
183.5
2453
Male, age 74, right hemisphere
174.2
2746
Female, age 85, left hemisphere
132.9
Lateral parabrachial nucleus nTPM: 209.6
2792
Male, age 76, both hemispheres
320.3
2790
Male, age 61, both hemispheres
208.7
2013
Male, age 80, both hemispheres
196.6
2139
Female, age 85, right hemisphere
112.9
Lateral vestibular nucleus nTPM: 261.2
2311
Male, age 80, both hemispheres
321.8
2184
Male, age 76, both hemispheres
200.5
Locus coeruleus nTPM: 114.6
2720
Male, age 74, both hemispheres
223.4
2162
Male, age 80, both hemispheres
139.2
2014
Male, age 55, unknown
103.6
2317
Female, age 72, unknown
90.8
2788
Male, age 74, unknown
90.7
2123
Female, age 91, both hemispheres
86.9
1980
Male, age 76, both hemispheres
67.9
Medial parabrachial nucleus nTPM: 263.7
2170
Female, age 91, both hemispheres
399.7
2463
Female, age 85, right hemisphere
243.9
2156
Male, age 61, both hemispheres
234.0
2854
Male, age 80, both hemispheres
224.3
2786
Male, age 76, both hemispheres
216.5
Medial periolivary nuclei nTPM: 178.4
2458
Female, age 91, both hemispheres
259.5
2081
Male, age 80, both hemispheres
219.4
2063
Male, age 76, both hemispheres
156.5
2171
Female, age 85, both hemispheres
137.1
2791
Male, age 74, right hemisphere
119.7
Motor facial nucleus nTPM: 204.5
2697
Female, age 85, both hemispheres
259.7
2126
Male, age 61, both hemispheres
235.1
2795
Female, age 91, both hemispheres
234.0
2327
Male, age 80, both hemispheres
223.3
2365
Male, age 74, right hemisphere
142.1
2062
Male, age 76, both hemispheres
132.6
Motor trigeminal nucleus nTPM: 245.3
2321
Female, age 91, both hemispheres
380.7
2309
Male, age 76, both hemispheres
229.1
2335
Male, age 61, both hemispheres
219.3
2560
Male, age 74, both hemispheres
202.9
2079
Male, age 80, both hemispheres
194.4
Nuclei of the trapezoid body nTPM: 194.8
2166
Male, age 80, both hemispheres
286.7
2368
Female, age 91, both hemispheres
242.2
2159
Male, age 61, both hemispheres
179.5
1983
Male, age 76, both hemispheres
153.0
2735
Female, age 85, both hemispheres
112.5
Nucleus raphe magnus nTPM: 180.9
2459
Female, age 91, both hemispheres
294.9
2328
Male, age 80, both hemispheres
225.6
2051
Male, age 76, both hemispheres
204.1
2455
Male, age 74, both hemispheres
142.7
2172
Female, age 85, both hemispheres
117.2
2160
Male, age 61, both hemispheres
101.1
Paramedian reticular nucleus nTPM: 242.7
2052
Male, age 76, both hemispheres
383.0
2057
Male, age 80, both hemispheres
207.8
2313
Male, age 61, both hemispheres
194.3
2050
Female, age 85, both hemispheres
185.6
Pedunculopontine tegmental nucleus nTPM: 179.2
2338
Male, age 61, both hemispheres
217.1
2334
Male, age 80, both hemispheres
191.5
1921
Female, age 85, both hemispheres
129.1
Pontine nuclei nTPM: 188.4
2319
Female, age 91, both hemispheres
310.1
1968
Male, age 76, left hemisphere
216.2
2115
Male, age 80, left hemisphere
204.8
2454
Male, age 74, left hemisphere
190.0
1863
Male, age 55, unknown
180.2
2109
Female, age 72, unknown
178.6
2787
Female, age 85, both hemispheres
118.3
2727
Male, age 61, right hemisphere
109.1
Pontine raphe nucleus nTPM: 118.3
2122
Female, age 85, midline
127.9
2853
Male, age 76, midline
108.8
Posteroventral cochlear nucleus nTPM: 274.0
2341
Male, age 80, both hemispheres
414.4
2135
Female, age 91, both hemispheres
338.3
2371
Male, age 61, both hemispheres
293.2
2070
Male, age 76, both hemispheres
169.4
2752
Female, age 85, both hemispheres
154.8
Principal sensory trigeminal nucleus nTPM: 202.6
2367
Female, age 91, left hemisphere
308.9
2324
Male, age 76, both hemispheres
203.3
2008
Male, age 80, left hemisphere
149.2
2158
Male, age 61, both hemispheres
149.0
Reticular pontine nucleus, caudal nTPM: 228.5
2457
Female, age 91, both hemispheres
296.4
2559
Male, age 74, both hemispheres
263.3
2332
Male, age 80, right hemisphere
177.8
2092
Male, age 76, both hemispheres
176.3
Reticular pontine nucleus, oral nTPM: 212.1
2366
Female, age 91, both hemispheres
283.8
2361
Male, age 74, both hemispheres
205.0
1939
Male, age 80, both hemispheres
201.3
2167
Male, age 76, both hemispheres
190.1
2012
Female, age 85, both hemispheres
180.5
Reticulotegmental nucleus nTPM: 252.6
2322
Female, age 91, both hemispheres
326.5
2452
Male, age 74, both hemispheres
248.7
2333
Male, age 80, both hemispheres
248.3
2325
Male, age 76, both hemispheres
186.9
Spinal trigeminal nucleus, oral nTPM: 168.9
2164
Male, age 80, both hemispheres
230.1
1978
Male, age 76, both hemispheres
139.6
2737
Female, age 85, both hemispheres
137.1
Subcoeruleus area nTPM: 204.9
2369
Female, age 85, left hemisphere
291.5
2451
Male, age 74, both hemispheres
216.3
2089
Male, age 76, left hemisphere
199.3
1958
Male, age 80, both hemispheres
194.3
2323
Female, age 91, left hemisphere
123.2
Superior olive nTPM: 208.2
2561
Female, age 91, both hemispheres
275.7
2020
Male, age 76, both hemispheres
254.0
2329
Male, age 80, right hemisphere
247.2
1875
Female, age 85, both hemispheres
140.4
2364
Male, age 74, right hemisphere
123.9
Ventral periolivary nuclei nTPM: 197.5
2023
Male, age 76, both hemispheres
242.3
2794
Female, age 91, left hemisphere
234.6
2165
Male, age 80, both hemispheres
195.5
2130
Female, age 85, both hemispheres
117.7
Ventrolateral tegmental area, A5 NE cell group nTPM: 183.0
2456
Female, age 91, both hemispheres
238.7
2161
Male, age 80, both hemispheres
194.6
1959
Male, age 76, both hemispheres
176.8
2359
Male, age 61, both hemispheres
176.6
2840
Female, age 85, both hemispheres
171.0
2449
Male, age 74, both hemispheres
140.6
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
