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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
81.3
nTPM
Monaco:
172.7
nTPM
Schmiedel:
985.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
81.3
HPA sample
nTPM
gdT-cell nTPM: 36.6
Samples: 6
Max nTPM: 47.3
Min nTPM: 28.7
P10809_1007
33.6
P10809_1022
47.3
P10809_1041
31.3
P10809_1060
38.6
P10809_1077
28.7
P10809_1098
40.2
MAIT T-cell nTPM: 71.9
Samples: 6
Max nTPM: 110.1
Min nTPM: 52.2
P10809_1006
68.8
P10809_1024
110.1
P10809_1043
58.4
P10809_1062
71.7
P10809_1083
70.2
P10809_1097
52.2
Memory CD4 T-cell nTPM: 59.9
Samples: 6
Max nTPM: 71.4
Min nTPM: 49.4
P10809_1014
71.4
P10809_1026
62.9
P10809_1045
64.0
P10809_1064
49.4
P10809_1086
51.7
P10809_1113
60.1
Memory CD8 T-cell nTPM: 54.4
Samples: 5
Max nTPM: 64.6
Min nTPM: 41.4
P10809_1012
64.6
P10809_1027
64.6
P10809_1046
41.4
P10809_1065
47.1
P10809_1111
54.4
Naive CD4 T-cell nTPM: 81.3
Samples: 6
Max nTPM: 102.6
Min nTPM: 61.0
P10809_1015
102.6
P10809_1030
88.2
P10809_1049
70.1
P10809_1068
86.9
P10809_1085
61.0
P10809_1112
78.8
Naive CD8 T-cell nTPM: 70.6
Samples: 6
Max nTPM: 107.5
Min nTPM: 42.6
P10809_1016
107.5
P10809_1031
78.3
P10809_1050
64.4
P10809_1069
60.0
P10809_1087
42.6
P10809_1110
71.0
T-reg nTPM: 51.9
Samples: 6
Max nTPM: 67.2
Min nTPM: 36.7
P10809_1018
67.2
P10809_1037
66.0
P10809_1056
36.7
P10809_1075
49.2
P10809_1094
39.4
P10809_1106
53.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
172.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 117.2
Samples: 4
Max nTPM: 133.3
Min nTPM: 101.1
RHH5202_R3573
133.3
RHH5230_R3602
116.3
RHH5259_R3631
101.1
RHH5288_R3660
118.1
Effector memory CD8 T-cell nTPM: 120.3
Samples: 4
Max nTPM: 143.5
Min nTPM: 71.8
RHH5203_R3574
140.4
RHH5231_R3603
71.8
RHH5260_R3632
125.3
RHH5289_R3661
143.5
MAIT T-cell nTPM: 115.5
Samples: 4
Max nTPM: 138.5
Min nTPM: 93.9
RHH5233_R3605
96.6
RHH5205_R3576
138.5
RHH5262_R3634
133.0
RHH5297_R3663
93.9
Memory CD4 T-cell TFH nTPM: 114.0
Samples: 4
Max nTPM: 129.5
Min nTPM: 101.1
RHH5300_R3666
101.1
RHH5236_R3608
119.6
RHH5265_R3637
129.5
RHH5208_R3579
105.6
Memory CD4 T-cell Th1 nTPM: 102.3
Samples: 4
Max nTPM: 111.2
Min nTPM: 78.5
RHH5210_R3581
110.5
RHH5302_R3668
111.2
RHH5238_R3610
78.5
RHH5267_R3639
109.0
Memory CD4 T-cell Th1/Th17 nTPM: 113.6
Samples: 4
Max nTPM: 144.4
Min nTPM: 84.3
RHH5303_R3669
128.1
RHH5211_R3582
144.4
RHH5239_R3611
84.3
RHH5268_R3640
97.5
Memory CD4 T-cell Th17 nTPM: 129.6
Samples: 4
Max nTPM: 167.1
Min nTPM: 109.1
RHH5304_R3670
112.3
RHH5212_R3583
129.9
RHH5240_R3612
167.1
RHH5269_R3641
109.1
Memory CD4 T-cell Th2 nTPM: 118.2
Samples: 4
Max nTPM: 127.3
Min nTPM: 106.2
RHH5305_R3671
127.3
RHH5213_R3584
120.2
RHH5241_R3613
119.2
RHH5270_R3642
106.2
Naive CD4 T-cell nTPM: 135.9
Samples: 4
Max nTPM: 169.4
Min nTPM: 110.5
RHH5306_R3672
135.3
RHH5214_R3585
169.4
RHH5242_R3614
128.4
RHH5271_R3643
110.5
Naive CD8 T-cell nTPM: 172.7
Samples: 4
Max nTPM: 210.8
Min nTPM: 149.7
RHH5201_R3572
172.4
RHH5229_R3601
149.7
RHH5258_R3630
210.8
RHH5287_R3659
158.0
Non-Vd2 gdTCR nTPM: 73.5
Samples: 4
Max nTPM: 93.2
Min nTPM: 56.0
RHH5235_R3607
56.0
RHH5264_R3636
93.2
RHH5207_R3578
75.4
RHH5299_R3665
69.2
T-reg nTPM: 121.4
Samples: 4
Max nTPM: 132.7
Min nTPM: 107.7
RHH5301_R3667
121.6
RHH5237_R3609
123.4
RHH5266_R3638
132.7
RHH5209_R3580
107.7
Terminal effector memory CD4 T-cell nTPM: 84.8
Samples: 2
Max nTPM: 89.2
Min nTPM: 80.4
RHH5243_R3615
80.4
RHH5272_R3644
89.2
Terminal effector memory CD8 T-cell nTPM: 83.6
Samples: 4
Max nTPM: 94.5
Min nTPM: 63.7
RHH5232_R3604
94.5
RHH5204_R3575
63.7
RHH5261_R3633
89.0
RHH5296_R3662
87.0
Vd2 gdTCR nTPM: 106.7
Samples: 4
Max nTPM: 145.3
Min nTPM: 76.4
RHH5234_R3606
108.1
RHH5206_R3577
97.0
RHH5263_R3635
145.3
RHH5298_R3664
76.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
