We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
41.6
nTPM
Monaco:
103.3
nTPM
Schmiedel:
108.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
41.6
HPA sample
nTPM
gdT-cell nTPM: 41.6
Samples: 6
Max nTPM: 54.7
Min nTPM: 29.2
P10809_1007
29.2
P10809_1022
30.5
P10809_1041
50.1
P10809_1060
38.1
P10809_1077
46.9
P10809_1098
54.7
MAIT T-cell nTPM: 36.5
Samples: 6
Max nTPM: 50.5
Min nTPM: 28.4
P10809_1006
35.2
P10809_1024
36.8
P10809_1043
50.5
P10809_1062
36.2
P10809_1083
31.7
P10809_1097
28.4
Memory CD4 T-cell nTPM: 34.1
Samples: 6
Max nTPM: 44.7
Min nTPM: 26.8
P10809_1014
30.0
P10809_1026
27.3
P10809_1045
26.8
P10809_1064
38.6
P10809_1086
36.9
P10809_1113
44.7
Memory CD8 T-cell nTPM: 35.4
Samples: 5
Max nTPM: 41.5
Min nTPM: 26.3
P10809_1012
33.0
P10809_1027
37.3
P10809_1046
26.3
P10809_1065
41.5
P10809_1111
38.8
Naive CD4 T-cell nTPM: 31.9
Samples: 6
Max nTPM: 37.9
Min nTPM: 25.7
P10809_1015
26.0
P10809_1030
37.9
P10809_1049
27.1
P10809_1068
25.7
P10809_1085
37.1
P10809_1112
37.3
Naive CD8 T-cell nTPM: 35.1
Samples: 6
Max nTPM: 49.9
Min nTPM: 28.5
P10809_1016
28.5
P10809_1031
37.1
P10809_1050
30.4
P10809_1069
29.0
P10809_1087
49.9
P10809_1110
35.7
T-reg nTPM: 30.9
Samples: 6
Max nTPM: 37.7
Min nTPM: 25.9
P10809_1018
30.2
P10809_1037
26.5
P10809_1056
25.9
P10809_1075
29.7
P10809_1094
35.4
P10809_1106
37.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
103.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 86.6
Samples: 4
Max nTPM: 108.1
Min nTPM: 54.8
RHH5202_R3573
108.1
RHH5230_R3602
81.2
RHH5259_R3631
54.8
RHH5288_R3660
102.4
Effector memory CD8 T-cell nTPM: 95.4
Samples: 4
Max nTPM: 116.7
Min nTPM: 74.6
RHH5203_R3574
93.8
RHH5231_R3603
116.7
RHH5260_R3632
74.6
RHH5289_R3661
96.5
MAIT T-cell nTPM: 78.0
Samples: 4
Max nTPM: 89.3
Min nTPM: 55.7
RHH5233_R3605
80.2
RHH5205_R3576
55.7
RHH5262_R3634
86.7
RHH5297_R3663
89.3
Memory CD4 T-cell TFH nTPM: 103.3
Samples: 4
Max nTPM: 128.1
Min nTPM: 82.3
RHH5300_R3666
82.3
RHH5236_R3608
128.1
RHH5265_R3637
87.6
RHH5208_R3579
115.2
Memory CD4 T-cell Th1 nTPM: 80.9
Samples: 4
Max nTPM: 98.9
Min nTPM: 57.9
RHH5210_R3581
92.1
RHH5302_R3668
98.9
RHH5238_R3610
57.9
RHH5267_R3639
74.8
Memory CD4 T-cell Th1/Th17 nTPM: 91.8
Samples: 4
Max nTPM: 133.1
Min nTPM: 56.0
RHH5303_R3669
133.1
RHH5211_R3582
106.0
RHH5239_R3611
56.0
RHH5268_R3640
72.0
Memory CD4 T-cell Th17 nTPM: 74.1
Samples: 4
Max nTPM: 105.2
Min nTPM: 53.6
RHH5304_R3670
71.0
RHH5212_R3583
105.2
RHH5240_R3612
66.7
RHH5269_R3641
53.6
Memory CD4 T-cell Th2 nTPM: 81.7
Samples: 4
Max nTPM: 94.6
Min nTPM: 66.2
RHH5305_R3671
79.9
RHH5213_R3584
86.2
RHH5241_R3613
94.6
RHH5270_R3642
66.2
Naive CD4 T-cell nTPM: 82.5
Samples: 4
Max nTPM: 101.1
Min nTPM: 63.3
RHH5306_R3672
84.8
RHH5214_R3585
101.1
RHH5242_R3614
80.8
RHH5271_R3643
63.3
Naive CD8 T-cell nTPM: 81.0
Samples: 4
Max nTPM: 100.2
Min nTPM: 53.2
RHH5201_R3572
87.3
RHH5229_R3601
53.2
RHH5258_R3630
100.2
RHH5287_R3659
83.2
Non-Vd2 gdTCR nTPM: 92.1
Samples: 4
Max nTPM: 131.7
Min nTPM: 62.5
RHH5235_R3607
62.5
RHH5264_R3636
131.7
RHH5207_R3578
84.3
RHH5299_R3665
89.8
T-reg nTPM: 90.3
Samples: 4
Max nTPM: 126.4
Min nTPM: 64.4
RHH5301_R3667
89.4
RHH5237_R3609
126.4
RHH5266_R3638
64.4
RHH5209_R3580
81.1
Terminal effector memory CD4 T-cell nTPM: 82.1
Samples: 2
Max nTPM: 98.5
Min nTPM: 65.7
RHH5243_R3615
65.7
RHH5272_R3644
98.5
Terminal effector memory CD8 T-cell nTPM: 87.9
Samples: 4
Max nTPM: 100.1
Min nTPM: 69.6
RHH5232_R3604
85.8
RHH5204_R3575
100.1
RHH5261_R3633
69.6
RHH5296_R3662
96.1
Vd2 gdTCR nTPM: 96.3
Samples: 4
Max nTPM: 122.2
Min nTPM: 83.7
RHH5234_R3606
83.7
RHH5206_R3577
122.2
RHH5263_R3635
86.2
RHH5298_R3664
93.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
