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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
6684.0
nTPM
Monaco:
971.8
nTPM
Schmiedel:
1739.5
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
6684.0
HPA sample
nTPM
gdT-cell nTPM: 2406.4
Samples: 6
Max nTPM: 3003.7
Min nTPM: 1929.1
P10809_1007
2770.1
P10809_1022
2031.8
P10809_1041
3003.7
P10809_1060
1929.1
P10809_1077
2353.8
P10809_1098
2349.9
MAIT T-cell nTPM: 4335.5
Samples: 6
Max nTPM: 5128.3
Min nTPM: 3471.6
P10809_1006
4261.5
P10809_1024
4483.5
P10809_1043
4393.3
P10809_1062
4274.7
P10809_1083
3471.6
P10809_1097
5128.3
Memory CD4 T-cell nTPM: 4765.5
Samples: 6
Max nTPM: 5827.6
Min nTPM: 3335.0
P10809_1014
5487.8
P10809_1026
5827.6
P10809_1045
5211.5
P10809_1064
4029.3
P10809_1086
3335.0
P10809_1113
4701.9
Memory CD8 T-cell nTPM: 3486.3
Samples: 5
Max nTPM: 4063.2
Min nTPM: 3075.2
P10809_1012
4063.2
P10809_1027
3382.2
P10809_1046
3653.9
P10809_1065
3075.2
P10809_1111
3257.0
Naive CD4 T-cell nTPM: 6684.0
Samples: 6
Max nTPM: 7476.8
Min nTPM: 4889.7
P10809_1015
7415.6
P10809_1030
7358.9
P10809_1049
7476.8
P10809_1068
7024.4
P10809_1085
4889.7
P10809_1112
5938.7
Naive CD8 T-cell nTPM: 5234.5
Samples: 6
Max nTPM: 8697.0
Min nTPM: 2351.6
P10809_1016
8697.0
P10809_1031
5698.5
P10809_1050
4943.5
P10809_1069
4628.2
P10809_1087
2351.6
P10809_1110
5088.4
T-reg nTPM: 3953.7
Samples: 6
Max nTPM: 4725.9
Min nTPM: 3441.4
P10809_1018
3441.4
P10809_1037
3877.5
P10809_1056
4725.9
P10809_1075
4119.0
P10809_1094
4048.6
P10809_1106
3509.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
971.8
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 671.9
Samples: 4
Max nTPM: 934.1
Min nTPM: 353.5
RHH5202_R3573
353.5
RHH5230_R3602
880.4
RHH5259_R3631
934.1
RHH5288_R3660
519.7
Effector memory CD8 T-cell nTPM: 310.6
Samples: 4
Max nTPM: 503.4
Min nTPM: 221.4
RHH5203_R3574
221.4
RHH5231_R3603
285.5
RHH5260_R3632
503.4
RHH5289_R3661
232.1
MAIT T-cell nTPM: 518.2
Samples: 4
Max nTPM: 651.2
Min nTPM: 360.3
RHH5233_R3605
360.3
RHH5205_R3576
651.2
RHH5262_R3634
553.1
RHH5297_R3663
508.1
Memory CD4 T-cell TFH nTPM: 485.8
Samples: 4
Max nTPM: 676.9
Min nTPM: 359.9
RHH5300_R3666
437.0
RHH5236_R3608
676.9
RHH5265_R3637
469.4
RHH5208_R3579
359.9
Memory CD4 T-cell Th1 nTPM: 845.8
Samples: 4
Max nTPM: 1450.7
Min nTPM: 393.3
RHH5210_R3581
393.3
RHH5302_R3668
745.4
RHH5238_R3610
1450.7
RHH5267_R3639
793.8
Memory CD4 T-cell Th1/Th17 nTPM: 691.5
Samples: 4
Max nTPM: 906.1
Min nTPM: 448.4
RHH5303_R3669
518.0
RHH5211_R3582
448.4
RHH5239_R3611
893.5
RHH5268_R3640
906.1
Memory CD4 T-cell Th17 nTPM: 692.8
Samples: 4
Max nTPM: 869.7
Min nTPM: 519.2
RHH5304_R3670
869.7
RHH5212_R3583
519.2
RHH5240_R3612
754.6
RHH5269_R3641
627.6
Memory CD4 T-cell Th2 nTPM: 697.9
Samples: 4
Max nTPM: 1049.3
Min nTPM: 573.6
RHH5305_R3671
1049.3
RHH5213_R3584
579.7
RHH5241_R3613
573.6
RHH5270_R3642
588.8
Naive CD4 T-cell nTPM: 971.8
Samples: 4
Max nTPM: 1140.0
Min nTPM: 734.5
RHH5306_R3672
1140.0
RHH5214_R3585
1066.0
RHH5242_R3614
734.5
RHH5271_R3643
946.5
Naive CD8 T-cell nTPM: 953.8
Samples: 4
Max nTPM: 1476.4
Min nTPM: 505.3
RHH5201_R3572
505.3
RHH5229_R3601
1476.4
RHH5258_R3630
629.2
RHH5287_R3659
1204.3
Non-Vd2 gdTCR nTPM: 358.8
Samples: 4
Max nTPM: 556.2
Min nTPM: 270.0
RHH5235_R3607
556.2
RHH5264_R3636
306.8
RHH5207_R3578
270.0
RHH5299_R3665
302.1
T-reg nTPM: 662.7
Samples: 4
Max nTPM: 769.4
Min nTPM: 456.0
RHH5301_R3667
674.0
RHH5237_R3609
456.0
RHH5266_R3638
769.4
RHH5209_R3580
751.4
Terminal effector memory CD4 T-cell nTPM: 386.8
Samples: 2
Max nTPM: 458.1
Min nTPM: 315.5
RHH5243_R3615
458.1
RHH5272_R3644
315.5
Terminal effector memory CD8 T-cell nTPM: 408.6
Samples: 4
Max nTPM: 564.0
Min nTPM: 240.9
RHH5232_R3604
240.9
RHH5204_R3575
564.0
RHH5261_R3633
531.7
RHH5296_R3662
297.7
Vd2 gdTCR nTPM: 636.6
Samples: 4
Max nTPM: 880.6
Min nTPM: 431.7
RHH5234_R3606
431.7
RHH5206_R3577
880.6
RHH5263_R3635
657.7
RHH5298_R3664
576.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.