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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
280.9
nTPM
FANTOM5:
268.7
Scaled Tags Per Million
Pig:
308.2
nTPM
Allen mouse:
9.0
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
280.9
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 112.7
1984
Male, age 76, both hemispheres
134.2
2301
Female, age 85, both hemispheres
132.0
2188
Female, age 91, both hemispheres
97.5
2090
Male, age 80, both hemispheres
87.2
Dorsal cochlear nucleus nTPM: 90.2
2058
Male, age 76, both hemispheres
122.2
2370
Male, age 61, both hemispheres
105.1
2187
Female, age 91, both hemispheres
99.4
2378
Male, age 80, both hemispheres
62.3
2802
Male, age 74, right hemisphere
61.8
Dorsal tegmental nucleus nTPM: 98.0
1936
Male, age 76, left hemisphere
115.9
2083
Male, age 80, both hemispheres
111.9
2358
Male, age 61, both hemispheres
83.4
2326
Male, age 74, both hemispheres
80.8
Dorsolateral tegmental area nTPM: 89.8
2654
Male, age 80, both hemispheres
119.4
2141
Male, age 76, both hemispheres
108.5
2751
Female, age 85, both hemispheres
101.6
2360
Male, age 74, both hemispheres
86.7
2337
Male, age 61, both hemispheres
32.8
Kolliker-Fuse nucleus nTPM: 113.6
2163
Male, age 80, both hemispheres
143.7
2793
Female, age 91, left hemisphere
106.3
2315
Male, age 76, right hemisphere
90.9
Lateral lemniscal nuclei nTPM: 235.5
2036
Male, age 80, both hemispheres
275.9
2453
Male, age 74, right hemisphere
272.9
2169
Male, age 76, both hemispheres
269.7
2746
Female, age 85, left hemisphere
251.0
2320
Female, age 91, left hemisphere
108.1
Lateral parabrachial nucleus nTPM: 148.3
2139
Female, age 85, right hemisphere
253.1
2013
Male, age 80, both hemispheres
143.7
2790
Male, age 61, both hemispheres
135.3
2792
Male, age 76, both hemispheres
61.2
Lateral vestibular nucleus nTPM: 111.4
2184
Male, age 76, both hemispheres
133.3
2311
Male, age 80, both hemispheres
89.4
Locus coeruleus nTPM: 187.9
2123
Female, age 91, both hemispheres
287.2
2720
Male, age 74, both hemispheres
234.6
1980
Male, age 76, both hemispheres
196.2
2014
Male, age 55, unknown
187.0
2162
Male, age 80, both hemispheres
143.8
2788
Male, age 74, unknown
140.8
2317
Female, age 72, unknown
125.9
Medial parabrachial nucleus nTPM: 126.4
2854
Male, age 80, both hemispheres
168.4
2170
Female, age 91, both hemispheres
128.2
2156
Male, age 61, both hemispheres
121.5
2786
Male, age 76, both hemispheres
114.2
2463
Female, age 85, right hemisphere
99.5
Medial periolivary nuclei nTPM: 225.2
2171
Female, age 85, both hemispheres
399.5
2063
Male, age 76, both hemispheres
293.7
2791
Male, age 74, right hemisphere
218.4
2081
Male, age 80, both hemispheres
121.5
2458
Female, age 91, both hemispheres
93.0
Motor facial nucleus nTPM: 213.0
2062
Male, age 76, both hemispheres
322.7
2365
Male, age 74, right hemisphere
269.5
2327
Male, age 80, both hemispheres
222.7
2697
Female, age 85, both hemispheres
221.1
2126
Male, age 61, both hemispheres
133.6
2795
Female, age 91, both hemispheres
108.2
Motor trigeminal nucleus nTPM: 145.0
2079
Male, age 80, both hemispheres
225.6
2560
Male, age 74, both hemispheres
176.2
2335
Male, age 61, both hemispheres
124.2
2309
Male, age 76, both hemispheres
120.0
2321
Female, age 91, both hemispheres
79.0
Nuclei of the trapezoid body nTPM: 264.0
2735
Female, age 85, both hemispheres
375.9
2159
Male, age 61, both hemispheres
362.9
1983
Male, age 76, both hemispheres
305.7
2166
Male, age 80, both hemispheres
165.7
2368
Female, age 91, both hemispheres
109.7
Nucleus raphe magnus nTPM: 280.9
2172
Female, age 85, both hemispheres
428.9
2160
Male, age 61, both hemispheres
390.1
2455
Male, age 74, both hemispheres
358.0
2051
Male, age 76, both hemispheres
207.1
2328
Male, age 80, both hemispheres
188.9
2459
Female, age 91, both hemispheres
112.3
Paramedian reticular nucleus nTPM: 184.0
2050
Female, age 85, both hemispheres
315.6
2057
Male, age 80, both hemispheres
162.4
2313
Male, age 61, both hemispheres
162.2
2052
Male, age 76, both hemispheres
95.6
Pedunculopontine tegmental nucleus nTPM: 131.2
2334
Male, age 80, both hemispheres
143.6
1921
Female, age 85, both hemispheres
142.5
2338
Male, age 61, both hemispheres
107.6
Pontine nuclei nTPM: 251.0
2787
Female, age 85, both hemispheres
395.6
2727
Male, age 61, right hemisphere
360.6
1863
Male, age 55, unknown
331.5
1968
Male, age 76, left hemisphere
258.0
2109
Female, age 72, unknown
240.4
2454
Male, age 74, left hemisphere
178.1
2115
Male, age 80, left hemisphere
137.0
2319
Female, age 91, both hemispheres
106.9
Pontine raphe nucleus nTPM: 199.8
2122
Female, age 85, midline
275.5
2853
Male, age 76, midline
124.0
Posteroventral cochlear nucleus nTPM: 106.2
2752
Female, age 85, both hemispheres
207.0
2070
Male, age 76, both hemispheres
151.0
2371
Male, age 61, both hemispheres
84.8
2341
Male, age 80, both hemispheres
51.6
2135
Female, age 91, both hemispheres
36.6
Principal sensory trigeminal nucleus nTPM: 199.3
2158
Male, age 61, both hemispheres
320.9
2008
Male, age 80, left hemisphere
258.3
2324
Male, age 76, both hemispheres
114.4
2367
Female, age 91, left hemisphere
103.8
Reticular pontine nucleus, caudal nTPM: 144.7
2332
Male, age 80, right hemisphere
210.3
2092
Male, age 76, both hemispheres
192.9
2457
Female, age 91, both hemispheres
90.4
2559
Male, age 74, both hemispheres
85.2
Reticular pontine nucleus, oral nTPM: 157.3
2361
Male, age 74, both hemispheres
244.4
2012
Female, age 85, both hemispheres
227.0
1939
Male, age 80, both hemispheres
120.7
2167
Male, age 76, both hemispheres
103.8
2366
Female, age 91, both hemispheres
90.4
Reticulotegmental nucleus nTPM: 133.5
2325
Male, age 76, both hemispheres
180.7
2452
Male, age 74, both hemispheres
137.4
2333
Male, age 80, both hemispheres
131.0
2322
Female, age 91, both hemispheres
84.9
Spinal trigeminal nucleus, oral nTPM: 131.2
2737
Female, age 85, both hemispheres
156.4
2164
Male, age 80, both hemispheres
118.9
1978
Male, age 76, both hemispheres
118.4
Subcoeruleus area nTPM: 163.2
2323
Female, age 91, left hemisphere
242.2
1958
Male, age 80, both hemispheres
206.7
2089
Male, age 76, left hemisphere
184.8
2451
Male, age 74, both hemispheres
104.7
2369
Female, age 85, left hemisphere
77.3
Superior olive nTPM: 210.3
1875
Female, age 85, both hemispheres
347.7
2364
Male, age 74, right hemisphere
245.0
2020
Male, age 76, both hemispheres
182.8
2329
Male, age 80, right hemisphere
157.8
2561
Female, age 91, both hemispheres
118.0
Ventral periolivary nuclei nTPM: 248.4
2130
Female, age 85, both hemispheres
395.3
2165
Male, age 80, both hemispheres
268.6
2023
Male, age 76, both hemispheres
165.2
2794
Female, age 91, left hemisphere
164.4
Ventrolateral tegmental area, A5 NE cell group nTPM: 165.5
2449
Male, age 74, both hemispheres
293.9
1959
Male, age 76, both hemispheres
199.5
2840
Female, age 85, both hemispheres
178.1
2161
Male, age 80, both hemispheres
157.5
2359
Male, age 61, both hemispheres
92.4
2456
Female, age 91, both hemispheres
71.7
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
308.2
Pig sample
Sample description
nTPM
Pons nTPM: 308.3
Samples: 4
Max nTPM: 430.3
Min nTPM: 215.8
Sample A
Female
430.3
Sample B
Female
215.8
Sample C
Male
248.7
Sample D
Male
338.2
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
