HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:227.5 nTPM
HPA Brain:315.2 nTPM
GTEx:227.5 nTPM
FANTOM5:119.0 Scaled Tags Per Million
Pig:341.5 nTPM
Mouse:374.6 nTPM
Allen mouse:11.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA062620
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 315.2
Sample id Sample description nTPM
Hippocampus
nTPM: 106.7
1898 Male, age 80, left hemisphere 175.7
1855 Male, age 76, left hemisphere 106.3
1911 Female, age 85, right hemisphere 98.1
2621 Female, age 67, right hemisphere 88.2
2148 Female, age 91, left hemisphere 87.5
2529 Female, age 94, left hemisphere 84.4
Dentate gyrus
nTPM: 118.7
1927 Female, age 91, both hemispheres 182.4
2246 Female, age 85, both hemispheres 145.7
2531 Female, age 67, both hemispheres 122.4
2528 Male, age 74, both hemispheres 120.1
2530 Female, age 94, left hemisphere 72.2
2010 Male, age 76, both hemispheres 69.7
Entorhinal gyrus
nTPM: 203.6
2613 Female, age 94, left hemisphere 299.6
2764 Male, age 80, right hemisphere 238.7
1938 Female, age 85, left hemisphere 224.0
1787 Male, age 76, left hemisphere 178.9
2686 Male, age 75, right hemisphere 173.8
2117 Female, age 91, right hemisphere 106.7
Hippocampus, CA1
nTPM: 155.2
2749 Male, age 80, left hemisphere 269.7
2082 Female, age 91, right hemisphere 170.9
2045 Male, age 76, both hemispheres 138.0
1873 Female, age 85, both hemispheres 100.3
2527 Male, age 74, both hemispheres 96.9
Hippocampus, CA2
nTPM: 128.0
1892 Male, age 76, both hemispheres 204.6
2437 Female, age 94, left hemisphere 151.7
2113 Female, age 91, right hemisphere 143.4
1940 Female, age 85, left hemisphere 113.1
2249 Male, age 74, both hemispheres 95.2
1963 Male, age 80, left hemisphere 60.4
Hippocampus, CA3
nTPM: 170.8
2137 Male, age 80, left hemisphere 281.6
1867 Male, age 76, both hemispheres 224.3
2620 Female, age 94, left hemisphere 182.4
1891 Female, age 85, both hemispheres 131.5
2436 Male, age 74, both hemispheres 107.7
2861 Female, age 67, both hemispheres 97.0
Parahippocampal cortex
nTPM: 217.8
1850 Male, age 80, both hemispheres 277.5
2693 Female, age 94, both hemispheres 266.5
2245 Female, age 91, both hemispheres 262.1
1990 Female, age 91, right hemisphere 257.4
2250 Female, age 67, right hemisphere 234.6
2018 Male, age 76, both hemispheres 206.2
1933 Female, age 85, both hemispheres 198.9
2532 Female, age 72, left hemisphere 198.3
2622 Female, age 67, right hemisphere 148.7
2692 Male, age 74, both hemispheres 128.1
Perirhinal gyrus
nTPM: 315.2
1847 Female, age 91, left hemisphere 464.2
2521 Female, age 94, right hemisphere 356.4
1794 Male, age 80, right hemisphere 284.8
1841 Female, age 85, right hemisphere 259.6
2848 Male, age 76, right hemisphere 210.9
Subiculum
nTPM: 147.1
1901 Male, age 80, both hemispheres 218.8
1977 Female, age 85, both hemispheres 209.5
2438 Female, age 94, left hemisphere 134.2
2042 Male, age 76, both hemispheres 124.0
2619 Male, age 74, both hemispheres 114.7
2729 Female, age 91, right hemisphere 81.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 227.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 227.5
Samples: 197

Max nTPM: 802.1
Min nTPM: 16.0
Std nTPM: 153.3
Median nTPM: 200.8
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 802.1
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 756.1
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 712.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 664.0
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 625.7
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 621.4
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 594.5
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 551.3
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 546.6
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 517.0
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 516.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 119.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 119.0
FF:10169-103B7 60 years, female 158.9
FF:10153-102I9 76 years, female 79.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 341.5
Pig sample Sample description nTPM
Subiculum
nTPM: 253.3
Samples: 4

Max nTPM: 353.2
Min nTPM: 209.8
Sample A Female 353.2
Sample B Female 214.2
Sample C Male 235.8
Sample D Male 209.8
Dorsal hippocampus
nTPM: 341.6
Samples: 4

Max nTPM: 448.4
Min nTPM: 261.0
Sample A Female 448.4
Sample B Female 379.1
Sample C Male 261.0
Sample D Male 277.7
Entorhinal cortex
nTPM: 253.8
Samples: 4

Max nTPM: 288.0
Min nTPM: 221.4
Sample A Female 288.0
Sample B Female 265.3
Sample C Male 221.4
Sample D Male 240.4
Ventral hippocampus
nTPM: 334.3
Samples: 4

Max nTPM: 423.8
Min nTPM: 210.3
Sample A Female 350.1
Sample B Female 210.3
Sample C Male 353.1
Sample D Male 423.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 374.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 374.7
Samples: 4

Max nTPM: 405.1
Min nTPM: 353.9
Sample A Male 353.9
Sample B Male 405.1
Sample C Female 367.7
Sample D Female 371.9
Hippocampal formation
nTPM: 344.2
Samples: 4

Max nTPM: 365.7
Min nTPM: 316.7
Sample A Male 365.7
Sample B Male 316.7
Sample C Female 354.6
Sample D Female 339.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 11.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 11.0
75988633 Antisense, RP_060620_02_E05, Mouse strain C57BL/6J (56 days, male) 12.9
71280733 Antisense, RP_050818_01_E04, Mouse strain C57BL/6J (56 days, male) 9.1

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