We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
75.8
nTPM
Monaco:
138.2
nTPM
Schmiedel:
54.3
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
75.8
HPA sample
nTPM
gdT-cell nTPM: 39.4
Samples: 6
Max nTPM: 43.7
Min nTPM: 30.0
P10809_1007
30.0
P10809_1022
41.9
P10809_1041
40.0
P10809_1060
38.6
P10809_1077
43.7
P10809_1098
42.3
MAIT T-cell nTPM: 49.5
Samples: 6
Max nTPM: 60.7
Min nTPM: 38.4
P10809_1006
38.4
P10809_1024
59.3
P10809_1043
49.4
P10809_1062
47.9
P10809_1083
41.1
P10809_1097
60.7
Memory CD4 T-cell nTPM: 48.1
Samples: 6
Max nTPM: 56.3
Min nTPM: 37.9
P10809_1014
42.9
P10809_1026
47.6
P10809_1045
37.9
P10809_1064
52.5
P10809_1086
56.3
P10809_1113
51.5
Memory CD8 T-cell nTPM: 49.2
Samples: 5
Max nTPM: 59.6
Min nTPM: 43.1
P10809_1012
43.7
P10809_1027
59.6
P10809_1046
43.1
P10809_1065
46.6
P10809_1111
52.9
Naive CD4 T-cell nTPM: 46.3
Samples: 6
Max nTPM: 54.2
Min nTPM: 43.4
P10809_1015
43.9
P10809_1030
54.2
P10809_1049
43.4
P10809_1068
44.6
P10809_1085
46.0
P10809_1112
45.8
Naive CD8 T-cell nTPM: 46.4
Samples: 6
Max nTPM: 52.7
Min nTPM: 39.7
P10809_1016
43.0
P10809_1031
52.4
P10809_1050
39.7
P10809_1069
47.5
P10809_1087
52.7
P10809_1110
43.0
T-reg nTPM: 75.8
Samples: 6
Max nTPM: 84.2
Min nTPM: 66.2
P10809_1018
76.0
P10809_1037
83.8
P10809_1056
75.5
P10809_1075
69.1
P10809_1094
66.2
P10809_1106
84.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
138.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 115.9
Samples: 4
Max nTPM: 149.2
Min nTPM: 69.7
RHH5202_R3573
149.2
RHH5230_R3602
101.8
RHH5259_R3631
69.7
RHH5288_R3660
143.0
Effector memory CD8 T-cell nTPM: 135.4
Samples: 4
Max nTPM: 179.2
Min nTPM: 96.2
RHH5203_R3574
179.2
RHH5231_R3603
117.9
RHH5260_R3632
96.2
RHH5289_R3661
148.1
MAIT T-cell nTPM: 113.9
Samples: 4
Max nTPM: 140.2
Min nTPM: 95.2
RHH5233_R3605
140.2
RHH5205_R3576
95.2
RHH5262_R3634
112.1
RHH5297_R3663
107.9
Memory CD4 T-cell TFH nTPM: 138.2
Samples: 4
Max nTPM: 149.1
Min nTPM: 127.8
RHH5300_R3666
149.1
RHH5236_R3608
136.5
RHH5265_R3637
127.8
RHH5208_R3579
139.2
Memory CD4 T-cell Th1 nTPM: 101.1
Samples: 4
Max nTPM: 121.1
Min nTPM: 71.3
RHH5210_R3581
120.3
RHH5302_R3668
121.1
RHH5238_R3610
71.3
RHH5267_R3639
91.6
Memory CD4 T-cell Th1/Th17 nTPM: 119.3
Samples: 4
Max nTPM: 167.2
Min nTPM: 61.1
RHH5303_R3669
167.2
RHH5211_R3582
162.5
RHH5239_R3611
61.1
RHH5268_R3640
86.5
Memory CD4 T-cell Th17 nTPM: 120.2
Samples: 4
Max nTPM: 157.6
Min nTPM: 84.0
RHH5304_R3670
136.9
RHH5212_R3583
157.6
RHH5240_R3612
84.0
RHH5269_R3641
102.2
Memory CD4 T-cell Th2 nTPM: 120.7
Samples: 4
Max nTPM: 129.9
Min nTPM: 107.7
RHH5305_R3671
125.7
RHH5213_R3584
129.9
RHH5241_R3613
107.7
RHH5270_R3642
119.3
Naive CD4 T-cell nTPM: 115.3
Samples: 4
Max nTPM: 139.8
Min nTPM: 97.2
RHH5306_R3672
116.1
RHH5214_R3585
139.8
RHH5242_R3614
97.2
RHH5271_R3643
108.2
Naive CD8 T-cell nTPM: 104.3
Samples: 4
Max nTPM: 155.9
Min nTPM: 50.8
RHH5201_R3572
155.9
RHH5229_R3601
50.8
RHH5258_R3630
121.3
RHH5287_R3659
89.0
Non-Vd2 gdTCR nTPM: 130.5
Samples: 4
Max nTPM: 169.2
Min nTPM: 70.9
RHH5235_R3607
70.9
RHH5264_R3636
149.7
RHH5207_R3578
169.2
RHH5299_R3665
132.1
T-reg nTPM: 113.8
Samples: 4
Max nTPM: 120.8
Min nTPM: 107.1
RHH5301_R3667
120.8
RHH5237_R3609
117.7
RHH5266_R3638
109.6
RHH5209_R3580
107.1
Terminal effector memory CD4 T-cell nTPM: 111.4
Samples: 2
Max nTPM: 136.6
Min nTPM: 86.2
RHH5243_R3615
86.2
RHH5272_R3644
136.6
Terminal effector memory CD8 T-cell nTPM: 115.5
Samples: 4
Max nTPM: 130.8
Min nTPM: 85.1
RHH5232_R3604
130.8
RHH5204_R3575
123.6
RHH5261_R3633
85.1
RHH5296_R3662
122.5
Vd2 gdTCR nTPM: 110.2
Samples: 4
Max nTPM: 125.6
Min nTPM: 95.2
RHH5234_R3606
105.8
RHH5206_R3577
114.1
RHH5263_R3635
95.2
RHH5298_R3664
125.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
