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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
71.0
nTPM
FANTOM5:
69.7
Scaled Tags Per Million
Pig:
23.1
nTPM
Allen mouse:
1.1
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
71.0
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 60.9
2090
Male, age 80, both hemispheres
64.3
1984
Male, age 76, both hemispheres
60.8
2188
Female, age 91, both hemispheres
59.5
2301
Female, age 85, both hemispheres
58.8
Dorsal cochlear nucleus nTPM: 64.7
2802
Male, age 74, right hemisphere
70.7
2378
Male, age 80, both hemispheres
68.1
2058
Male, age 76, both hemispheres
64.8
2187
Female, age 91, both hemispheres
60.9
2370
Male, age 61, both hemispheres
59.2
Dorsal tegmental nucleus nTPM: 64.2
2358
Male, age 61, both hemispheres
74.1
1936
Male, age 76, left hemisphere
62.5
2083
Male, age 80, both hemispheres
60.2
2326
Male, age 74, both hemispheres
59.9
Dorsolateral tegmental area nTPM: 61.3
2337
Male, age 61, both hemispheres
79.1
2141
Male, age 76, both hemispheres
64.5
2654
Male, age 80, both hemispheres
56.5
2360
Male, age 74, both hemispheres
53.9
2751
Female, age 85, both hemispheres
52.3
Kolliker-Fuse nucleus nTPM: 65.3
2315
Male, age 76, right hemisphere
71.9
2793
Female, age 91, left hemisphere
62.2
2163
Male, age 80, both hemispheres
61.9
Lateral lemniscal nuclei nTPM: 62.0
2320
Female, age 91, left hemisphere
64.7
2036
Male, age 80, both hemispheres
62.1
2169
Male, age 76, both hemispheres
62.0
2453
Male, age 74, right hemisphere
60.6
2746
Female, age 85, left hemisphere
60.6
Lateral parabrachial nucleus nTPM: 66.1
2790
Male, age 61, both hemispheres
77.5
2139
Female, age 85, right hemisphere
65.2
2013
Male, age 80, both hemispheres
62.9
2792
Male, age 76, both hemispheres
58.7
Lateral vestibular nucleus nTPM: 58.6
2184
Male, age 76, both hemispheres
59.4
2311
Male, age 80, both hemispheres
57.8
Locus coeruleus nTPM: 71.0
2162
Male, age 80, both hemispheres
75.9
1980
Male, age 76, both hemispheres
75.2
2014
Male, age 55, unknown
74.9
2720
Male, age 74, both hemispheres
73.4
2317
Female, age 72, unknown
72.8
2123
Female, age 91, both hemispheres
64.3
2788
Male, age 74, unknown
60.6
Medial parabrachial nucleus nTPM: 62.0
2156
Male, age 61, both hemispheres
72.9
2786
Male, age 76, both hemispheres
61.5
2463
Female, age 85, right hemisphere
58.8
2170
Female, age 91, both hemispheres
58.7
2854
Male, age 80, both hemispheres
58.2
Medial periolivary nuclei nTPM: 63.9
2171
Female, age 85, both hemispheres
68.4
2458
Female, age 91, both hemispheres
64.5
2063
Male, age 76, both hemispheres
63.9
2081
Male, age 80, both hemispheres
63.8
2791
Male, age 74, right hemisphere
58.7
Motor facial nucleus nTPM: 64.8
2327
Male, age 80, both hemispheres
71.5
2062
Male, age 76, both hemispheres
65.5
2126
Male, age 61, both hemispheres
64.5
2795
Female, age 91, both hemispheres
63.8
2697
Female, age 85, both hemispheres
62.3
2365
Male, age 74, right hemisphere
61.2
Motor trigeminal nucleus nTPM: 63.6
2321
Female, age 91, both hemispheres
68.1
2079
Male, age 80, both hemispheres
67.0
2335
Male, age 61, both hemispheres
65.7
2560
Male, age 74, both hemispheres
62.8
2309
Male, age 76, both hemispheres
54.5
Nuclei of the trapezoid body nTPM: 68.0
2735
Female, age 85, both hemispheres
73.7
2166
Male, age 80, both hemispheres
70.0
2368
Female, age 91, both hemispheres
66.9
2159
Male, age 61, both hemispheres
65.1
1983
Male, age 76, both hemispheres
64.5
Nucleus raphe magnus nTPM: 66.8
2172
Female, age 85, both hemispheres
75.2
2160
Male, age 61, both hemispheres
69.1
2328
Male, age 80, both hemispheres
68.2
2051
Male, age 76, both hemispheres
64.9
2459
Female, age 91, both hemispheres
62.3
2455
Male, age 74, both hemispheres
61.0
Paramedian reticular nucleus nTPM: 58.6
2057
Male, age 80, both hemispheres
63.7
2313
Male, age 61, both hemispheres
61.5
2050
Female, age 85, both hemispheres
60.8
2052
Male, age 76, both hemispheres
48.2
Pedunculopontine tegmental nucleus nTPM: 62.6
2338
Male, age 61, both hemispheres
66.1
2334
Male, age 80, both hemispheres
62.7
1921
Female, age 85, both hemispheres
59.2
Pontine nuclei nTPM: 62.2
2787
Female, age 85, both hemispheres
71.7
2115
Male, age 80, left hemisphere
68.1
1863
Male, age 55, unknown
66.8
2727
Male, age 61, right hemisphere
62.9
1968
Male, age 76, left hemisphere
61.2
2109
Female, age 72, unknown
60.1
2319
Female, age 91, both hemispheres
55.6
2454
Male, age 74, left hemisphere
51.2
Pontine raphe nucleus nTPM: 64.9
2853
Male, age 76, midline
66.6
2122
Female, age 85, midline
63.3
Posteroventral cochlear nucleus nTPM: 60.3
2070
Male, age 76, both hemispheres
65.2
2371
Male, age 61, both hemispheres
63.4
2341
Male, age 80, both hemispheres
58.3
2752
Female, age 85, both hemispheres
58.1
2135
Female, age 91, both hemispheres
56.3
Principal sensory trigeminal nucleus nTPM: 64.3
2158
Male, age 61, both hemispheres
70.6
2008
Male, age 80, left hemisphere
66.7
2324
Male, age 76, both hemispheres
61.1
2367
Female, age 91, left hemisphere
58.8
Reticular pontine nucleus, caudal nTPM: 62.7
2332
Male, age 80, right hemisphere
71.6
2457
Female, age 91, both hemispheres
64.4
2092
Male, age 76, both hemispheres
58.3
2559
Male, age 74, both hemispheres
56.7
Reticular pontine nucleus, oral nTPM: 54.8
2366
Female, age 91, both hemispheres
58.0
2167
Male, age 76, both hemispheres
56.7
2012
Female, age 85, both hemispheres
55.6
1939
Male, age 80, both hemispheres
55.4
2361
Male, age 74, both hemispheres
48.3
Reticulotegmental nucleus nTPM: 61.8
2322
Female, age 91, both hemispheres
63.5
2333
Male, age 80, both hemispheres
61.5
2452
Male, age 74, both hemispheres
61.5
2325
Male, age 76, both hemispheres
60.8
Spinal trigeminal nucleus, oral nTPM: 60.8
1978
Male, age 76, both hemispheres
63.2
2737
Female, age 85, both hemispheres
60.0
2164
Male, age 80, both hemispheres
59.2
Subcoeruleus area nTPM: 62.3
2089
Male, age 76, left hemisphere
67.4
2451
Male, age 74, both hemispheres
67.4
2323
Female, age 91, left hemisphere
66.1
1958
Male, age 80, both hemispheres
61.0
2369
Female, age 85, left hemisphere
49.8
Superior olive nTPM: 62.3
2329
Male, age 80, right hemisphere
70.1
2561
Female, age 91, both hemispheres
64.3
1875
Female, age 85, both hemispheres
62.8
2020
Male, age 76, both hemispheres
59.4
2364
Male, age 74, right hemisphere
55.1
Ventral periolivary nuclei nTPM: 64.3
2165
Male, age 80, both hemispheres
68.4
2130
Female, age 85, both hemispheres
66.6
2794
Female, age 91, left hemisphere
64.8
2023
Male, age 76, both hemispheres
57.5
Ventrolateral tegmental area, A5 NE cell group nTPM: 62.5
2456
Female, age 91, both hemispheres
66.9
2161
Male, age 80, both hemispheres
66.6
2449
Male, age 74, both hemispheres
63.1
2359
Male, age 61, both hemispheres
61.9
1959
Male, age 76, both hemispheres
60.7
2840
Female, age 85, both hemispheres
55.5
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
23.1
Pig sample
Sample description
nTPM
Pons nTPM: 23.1
Samples: 4
Max nTPM: 25.1
Min nTPM: 20.6
Sample A
Female
25.1
Sample B
Female
24.4
Sample C
Male
22.2
Sample D
Male
20.6
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
