HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:5.8 nTPM
HPA Brain:12.4 nTPM
GTEx:5.8 nTPM
FANTOM5:19.5 Scaled Tags Per Million
Pig:14.2 nTPM
Mouse:14.4 nTPM
Allen mouse:6.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA036142Antibody HPA053203
Glial cells LowNot detected
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 12.4
Sample id Sample description nTPM
Hippocampus
nTPM: 11.5
1898 Male, age 80, left hemisphere 12.0
2621 Female, age 67, right hemisphere 11.9
2529 Female, age 94, left hemisphere 11.7
2148 Female, age 91, left hemisphere 11.5
1855 Male, age 76, left hemisphere 10.9
1911 Female, age 85, right hemisphere 10.9
Dentate gyrus
nTPM: 11.4
2246 Female, age 85, both hemispheres 11.8
2531 Female, age 67, both hemispheres 11.5
1927 Female, age 91, both hemispheres 11.4
2010 Male, age 76, both hemispheres 11.4
2530 Female, age 94, left hemisphere 11.4
2528 Male, age 74, both hemispheres 10.7
Entorhinal gyrus
nTPM: 11.8
1938 Female, age 85, left hemisphere 12.3
1787 Male, age 76, left hemisphere 12.2
2764 Male, age 80, right hemisphere 12.2
2117 Female, age 91, right hemisphere 11.8
2686 Male, age 75, right hemisphere 11.3
2613 Female, age 94, left hemisphere 10.9
Hippocampus, CA1
nTPM: 11.7
2749 Male, age 80, left hemisphere 13.6
1873 Female, age 85, both hemispheres 11.3
2045 Male, age 76, both hemispheres 11.3
2527 Male, age 74, both hemispheres 11.3
2082 Female, age 91, right hemisphere 10.9
Hippocampus, CA2
nTPM: 11.3
1963 Male, age 80, left hemisphere 12.1
1892 Male, age 76, both hemispheres 11.7
1940 Female, age 85, left hemisphere 11.6
2113 Female, age 91, right hemisphere 11.3
2249 Male, age 74, both hemispheres 10.6
2437 Female, age 94, left hemisphere 10.4
Hippocampus, CA3
nTPM: 12.4
2137 Male, age 80, left hemisphere 13.4
2620 Female, age 94, left hemisphere 13.0
2436 Male, age 74, both hemispheres 12.6
1867 Male, age 76, both hemispheres 12.4
1891 Female, age 85, both hemispheres 11.9
2861 Female, age 67, both hemispheres 11.0
Parahippocampal cortex
nTPM: 11.4
1850 Male, age 80, both hemispheres 12.9
2532 Female, age 72, left hemisphere 12.0
1990 Female, age 91, right hemisphere 11.7
2692 Male, age 74, both hemispheres 11.7
2245 Female, age 91, both hemispheres 11.6
1933 Female, age 85, both hemispheres 11.4
2250 Female, age 67, right hemisphere 11.0
2018 Male, age 76, both hemispheres 10.9
2622 Female, age 67, right hemisphere 10.6
2693 Female, age 94, both hemispheres 10.0
Perirhinal gyrus
nTPM: 12.2
1794 Male, age 80, right hemisphere 13.1
1847 Female, age 91, left hemisphere 12.2
1841 Female, age 85, right hemisphere 12.0
2848 Male, age 76, right hemisphere 12.0
2521 Female, age 94, right hemisphere 11.4
Subiculum
nTPM: 12.0
2438 Female, age 94, left hemisphere 13.0
1901 Male, age 80, both hemispheres 12.8
1977 Female, age 85, both hemispheres 12.2
2042 Male, age 76, both hemispheres 11.6
2619 Male, age 74, both hemispheres 11.5
2729 Female, age 91, right hemisphere 11.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 5.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 5.8
Samples: 197

Max nTPM: 13.5
Min nTPM: 3.8
Std nTPM: 1.0
Median nTPM: 5.7
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 13.5
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 9.1
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 8.9
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 8.1
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 7.9
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 7.9
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 7.5
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 7.5
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 7.5
GTEX-1H1DG-0011-R1b-SM-CKZP1 70-79 years, male 7.4
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 7.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 19.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 19.5
FF:10153-102I9 76 years, female 20.3
FF:10169-103B7 60 years, female 18.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 14.2
Pig sample Sample description nTPM
Subiculum
nTPM: 14.1
Samples: 4

Max nTPM: 14.8
Min nTPM: 13.6
Sample A Female 14.8
Sample B Female 14.1
Sample C Male 13.8
Sample D Male 13.6
Dorsal hippocampus
nTPM: 14.2
Samples: 4

Max nTPM: 15.2
Min nTPM: 13.5
Sample A Female 13.9
Sample B Female 14.1
Sample C Male 15.2
Sample D Male 13.5
Entorhinal cortex
nTPM: 13.5
Samples: 4

Max nTPM: 14.9
Min nTPM: 12.8
Sample A Female 14.9
Sample B Female 13.3
Sample C Male 13.1
Sample D Male 12.8
Ventral hippocampus
nTPM: 14.0
Samples: 4

Max nTPM: 14.9
Min nTPM: 12.8
Sample A Female 14.1
Sample B Female 12.8
Sample C Male 14.9
Sample D Male 14.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 14.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 13.3
Samples: 4

Max nTPM: 15.3
Min nTPM: 10.7
Sample A Male 14.0
Sample B Male 13.0
Sample C Female 15.3
Sample D Female 10.7
Hippocampal formation
nTPM: 14.4
Samples: 4

Max nTPM: 17.3
Min nTPM: 11.9
Sample A Male 14.8
Sample B Male 17.3
Sample C Female 11.9
Sample D Female 13.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.0
69527986 Antisense, RP_050421_02_H04, Mouse strain C57BL/6J (56 days, male) 6.0

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