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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
35.6
nTPM
Monaco:
23.6
nTPM
Schmiedel:
172.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
35.6
HPA sample
nTPM
gdT-cell nTPM: 28.8
Samples: 6
Max nTPM: 40.3
Min nTPM: 19.0
P10809_1007
39.5
P10809_1022
27.9
P10809_1041
19.7
P10809_1060
19.0
P10809_1077
40.3
P10809_1098
26.5
MAIT T-cell nTPM: 35.6
Samples: 6
Max nTPM: 65.1
Min nTPM: 19.6
P10809_1006
34.7
P10809_1024
19.6
P10809_1043
35.0
P10809_1062
22.7
P10809_1083
36.3
P10809_1097
65.1
Memory CD4 T-cell nTPM: 20.2
Samples: 6
Max nTPM: 27.0
Min nTPM: 13.3
P10809_1014
17.4
P10809_1026
13.3
P10809_1045
16.1
P10809_1064
27.0
P10809_1086
26.4
P10809_1113
21.0
Memory CD8 T-cell nTPM: 27.4
Samples: 5
Max nTPM: 35.1
Min nTPM: 24.0
P10809_1012
24.0
P10809_1027
27.9
P10809_1046
24.5
P10809_1065
35.1
P10809_1111
25.7
Naive CD4 T-cell nTPM: 14.9
Samples: 6
Max nTPM: 26.1
Min nTPM: 8.6
P10809_1015
13.4
P10809_1030
8.6
P10809_1049
14.5
P10809_1068
15.7
P10809_1085
26.1
P10809_1112
11.3
Naive CD8 T-cell nTPM: 16.0
Samples: 6
Max nTPM: 30.8
Min nTPM: 7.3
P10809_1016
12.8
P10809_1031
7.3
P10809_1050
16.0
P10809_1069
17.8
P10809_1087
30.8
P10809_1110
11.4
T-reg nTPM: 13.5
Samples: 6
Max nTPM: 16.6
Min nTPM: 7.8
P10809_1018
13.4
P10809_1037
12.9
P10809_1056
7.8
P10809_1075
16.0
P10809_1094
16.6
P10809_1106
14.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
23.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 14.9
Samples: 4
Max nTPM: 27.7
Min nTPM: 5.2
RHH5202_R3573
5.2
RHH5230_R3602
11.9
RHH5259_R3631
14.6
RHH5288_R3660
27.7
Effector memory CD8 T-cell nTPM: 9.2
Samples: 4
Max nTPM: 16.6
Min nTPM: 2.2
RHH5203_R3574
10.5
RHH5231_R3603
16.6
RHH5260_R3632
7.3
RHH5289_R3661
2.2
MAIT T-cell nTPM: 18.3
Samples: 4
Max nTPM: 29.1
Min nTPM: 10.3
RHH5233_R3605
10.3
RHH5205_R3576
14.8
RHH5262_R3634
29.1
RHH5297_R3663
18.9
Memory CD4 T-cell TFH nTPM: 13.1
Samples: 4
Max nTPM: 23.5
Min nTPM: 0.0
RHH5300_R3666
15.7
RHH5236_R3608
23.5
RHH5265_R3637
13.0
RHH5208_R3579
0.0
Memory CD4 T-cell Th1 nTPM: 14.3
Samples: 4
Max nTPM: 22.9
Min nTPM: 10.0
RHH5210_R3581
13.8
RHH5302_R3668
22.9
RHH5238_R3610
10.5
RHH5267_R3639
10.0
Memory CD4 T-cell Th1/Th17 nTPM: 11.3
Samples: 4
Max nTPM: 19.6
Min nTPM: 1.8
RHH5303_R3669
1.8
RHH5211_R3582
15.3
RHH5239_R3611
8.3
RHH5268_R3640
19.6
Memory CD4 T-cell Th17 nTPM: 12.5
Samples: 4
Max nTPM: 18.7
Min nTPM: 6.9
RHH5304_R3670
10.0
RHH5212_R3583
18.7
RHH5240_R3612
6.9
RHH5269_R3641
14.4
Memory CD4 T-cell Th2 nTPM: 14.0
Samples: 4
Max nTPM: 18.1
Min nTPM: 11.7
RHH5305_R3671
18.1
RHH5213_R3584
12.7
RHH5241_R3613
13.3
RHH5270_R3642
11.7
Naive CD4 T-cell nTPM: 10.6
Samples: 4
Max nTPM: 13.4
Min nTPM: 7.9
RHH5306_R3672
13.2
RHH5214_R3585
13.4
RHH5242_R3614
8.0
RHH5271_R3643
7.9
Naive CD8 T-cell nTPM: 7.5
Samples: 4
Max nTPM: 14.4
Min nTPM: 0.9
RHH5201_R3572
0.9
RHH5229_R3601
3.9
RHH5258_R3630
14.4
RHH5287_R3659
10.9
Non-Vd2 gdTCR nTPM: 21.1
Samples: 4
Max nTPM: 35.9
Min nTPM: 15.9
RHH5235_R3607
16.4
RHH5264_R3636
15.9
RHH5207_R3578
16.1
RHH5299_R3665
35.9
T-reg nTPM: 14.5
Samples: 4
Max nTPM: 19.5
Min nTPM: 9.3
RHH5301_R3667
19.5
RHH5237_R3609
12.8
RHH5266_R3638
9.3
RHH5209_R3580
16.4
Terminal effector memory CD4 T-cell nTPM: 12.5
Samples: 2
Max nTPM: 16.6
Min nTPM: 8.4
RHH5243_R3615
8.4
RHH5272_R3644
16.6
Terminal effector memory CD8 T-cell nTPM: 23.2
Samples: 4
Max nTPM: 62.8
Min nTPM: 2.0
RHH5232_R3604
10.9
RHH5204_R3575
62.8
RHH5261_R3633
17.2
RHH5296_R3662
2.0
Vd2 gdTCR nTPM: 23.6
Samples: 4
Max nTPM: 34.8
Min nTPM: 13.0
RHH5234_R3606
18.1
RHH5206_R3577
28.3
RHH5263_R3635
13.0
RHH5298_R3664
34.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
