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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
85.6
nTPM
Monaco:
79.5
nTPM
Schmiedel:
225.6
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
85.6
HPA sample
nTPM
gdT-cell nTPM: 73.7
Samples: 6
Max nTPM: 78.3
Min nTPM: 63.7
P10809_1007
63.7
P10809_1022
75.7
P10809_1041
78.3
P10809_1060
75.9
P10809_1077
73.8
P10809_1098
74.6
MAIT T-cell nTPM: 85.6
Samples: 6
Max nTPM: 107.6
Min nTPM: 66.4
P10809_1006
80.6
P10809_1024
104.5
P10809_1043
76.7
P10809_1062
77.9
P10809_1083
66.4
P10809_1097
107.6
Memory CD4 T-cell nTPM: 48.4
Samples: 6
Max nTPM: 60.9
Min nTPM: 38.1
P10809_1014
38.1
P10809_1026
51.5
P10809_1045
43.6
P10809_1064
60.9
P10809_1086
55.5
P10809_1113
40.6
Memory CD8 T-cell nTPM: 80.3
Samples: 5
Max nTPM: 90.8
Min nTPM: 64.4
P10809_1012
64.4
P10809_1027
81.6
P10809_1046
75.2
P10809_1065
90.8
P10809_1111
89.3
Naive CD4 T-cell nTPM: 22.2
Samples: 6
Max nTPM: 31.2
Min nTPM: 17.1
P10809_1015
17.1
P10809_1030
27.1
P10809_1049
20.5
P10809_1068
17.8
P10809_1085
31.2
P10809_1112
19.3
Naive CD8 T-cell nTPM: 48.0
Samples: 6
Max nTPM: 66.7
Min nTPM: 27.5
P10809_1016
27.5
P10809_1031
46.1
P10809_1050
44.3
P10809_1069
66.7
P10809_1087
64.7
P10809_1110
38.5
T-reg nTPM: 25.5
Samples: 6
Max nTPM: 35.3
Min nTPM: 16.6
P10809_1018
16.6
P10809_1037
27.1
P10809_1056
35.3
P10809_1075
26.1
P10809_1094
20.6
P10809_1106
27.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
79.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 50.1
Samples: 4
Max nTPM: 57.8
Min nTPM: 44.8
RHH5202_R3573
45.5
RHH5230_R3602
52.4
RHH5259_R3631
57.8
RHH5288_R3660
44.8
Effector memory CD8 T-cell nTPM: 75.6
Samples: 4
Max nTPM: 92.6
Min nTPM: 59.3
RHH5203_R3574
60.2
RHH5231_R3603
90.4
RHH5260_R3632
92.6
RHH5289_R3661
59.3
MAIT T-cell nTPM: 67.9
Samples: 4
Max nTPM: 73.5
Min nTPM: 62.6
RHH5233_R3605
69.6
RHH5205_R3576
65.8
RHH5262_R3634
62.6
RHH5297_R3663
73.5
Memory CD4 T-cell TFH nTPM: 19.5
Samples: 4
Max nTPM: 26.5
Min nTPM: 13.4
RHH5300_R3666
16.6
RHH5236_R3608
26.5
RHH5265_R3637
13.4
RHH5208_R3579
21.4
Memory CD4 T-cell Th1 nTPM: 52.1
Samples: 4
Max nTPM: 60.0
Min nTPM: 47.2
RHH5210_R3581
47.2
RHH5302_R3668
53.2
RHH5238_R3610
60.0
RHH5267_R3639
48.0
Memory CD4 T-cell Th1/Th17 nTPM: 63.8
Samples: 4
Max nTPM: 92.8
Min nTPM: 36.4
RHH5303_R3669
71.2
RHH5211_R3582
92.8
RHH5239_R3611
36.4
RHH5268_R3640
54.6
Memory CD4 T-cell Th17 nTPM: 31.9
Samples: 4
Max nTPM: 48.3
Min nTPM: 19.6
RHH5304_R3670
48.3
RHH5212_R3583
37.6
RHH5240_R3612
19.6
RHH5269_R3641
22.2
Memory CD4 T-cell Th2 nTPM: 18.3
Samples: 4
Max nTPM: 24.1
Min nTPM: 13.2
RHH5305_R3671
21.7
RHH5213_R3584
24.1
RHH5241_R3613
13.2
RHH5270_R3642
14.1
Naive CD4 T-cell nTPM: 17.1
Samples: 4
Max nTPM: 21.0
Min nTPM: 12.1
RHH5306_R3672
21.0
RHH5214_R3585
14.6
RHH5242_R3614
20.6
RHH5271_R3643
12.1
Naive CD8 T-cell nTPM: 22.9
Samples: 4
Max nTPM: 30.8
Min nTPM: 18.1
RHH5201_R3572
30.8
RHH5229_R3601
18.1
RHH5258_R3630
18.8
RHH5287_R3659
24.0
Non-Vd2 gdTCR nTPM: 68.6
Samples: 4
Max nTPM: 100.5
Min nTPM: 46.4
RHH5235_R3607
46.4
RHH5264_R3636
100.5
RHH5207_R3578
65.1
RHH5299_R3665
62.3
T-reg nTPM: 26.6
Samples: 4
Max nTPM: 41.1
Min nTPM: 16.6
RHH5301_R3667
23.6
RHH5237_R3609
41.1
RHH5266_R3638
16.6
RHH5209_R3580
25.2
Terminal effector memory CD4 T-cell nTPM: 61.8
Samples: 2
Max nTPM: 70.5
Min nTPM: 53.1
RHH5243_R3615
53.1
RHH5272_R3644
70.5
Terminal effector memory CD8 T-cell nTPM: 72.3
Samples: 4
Max nTPM: 89.9
Min nTPM: 54.5
RHH5232_R3604
54.5
RHH5204_R3575
89.9
RHH5261_R3633
86.9
RHH5296_R3662
57.8
Vd2 gdTCR nTPM: 79.5
Samples: 4
Max nTPM: 88.3
Min nTPM: 74.3
RHH5234_R3606
88.3
RHH5206_R3577
75.9
RHH5263_R3635
74.3
RHH5298_R3664
79.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
