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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
339.6
nTPM
Monaco:
47.0
nTPM
Schmiedel:
94.6
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
339.6
HPA sample
nTPM
gdT-cell nTPM: 101.8
Samples: 6
Max nTPM: 118.6
Min nTPM: 59.4
P10809_1007
59.4
P10809_1022
103.0
P10809_1041
118.6
P10809_1060
110.4
P10809_1077
116.4
P10809_1098
103.1
MAIT T-cell nTPM: 137.2
Samples: 6
Max nTPM: 173.4
Min nTPM: 75.8
P10809_1006
75.8
P10809_1024
138.5
P10809_1043
145.6
P10809_1062
160.5
P10809_1083
129.1
P10809_1097
173.4
Memory CD4 T-cell nTPM: 191.5
Samples: 6
Max nTPM: 249.7
Min nTPM: 127.0
P10809_1014
127.0
P10809_1026
194.8
P10809_1045
249.7
P10809_1064
175.7
P10809_1086
186.3
P10809_1113
215.4
Memory CD8 T-cell nTPM: 147.3
Samples: 5
Max nTPM: 186.5
Min nTPM: 97.6
P10809_1012
97.6
P10809_1027
161.5
P10809_1046
161.4
P10809_1065
129.6
P10809_1111
186.5
Naive CD4 T-cell nTPM: 248.1
Samples: 6
Max nTPM: 415.9
Min nTPM: 138.4
P10809_1015
138.4
P10809_1030
239.4
P10809_1049
415.9
P10809_1068
231.0
P10809_1085
224.3
P10809_1112
239.6
Naive CD8 T-cell nTPM: 165.5
Samples: 6
Max nTPM: 203.6
Min nTPM: 119.9
P10809_1016
119.9
P10809_1031
197.2
P10809_1050
174.6
P10809_1069
171.3
P10809_1087
126.4
P10809_1110
203.6
T-reg nTPM: 339.6
Samples: 6
Max nTPM: 430.0
Min nTPM: 202.0
P10809_1018
202.0
P10809_1037
345.1
P10809_1056
401.5
P10809_1075
333.1
P10809_1094
325.9
P10809_1106
430.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
47.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 31.6
Samples: 4
Max nTPM: 37.7
Min nTPM: 23.7
RHH5202_R3573
23.7
RHH5230_R3602
30.1
RHH5259_R3631
37.7
RHH5288_R3660
34.7
Effector memory CD8 T-cell nTPM: 19.5
Samples: 4
Max nTPM: 27.0
Min nTPM: 16.0
RHH5203_R3574
17.8
RHH5231_R3603
17.3
RHH5260_R3632
27.0
RHH5289_R3661
16.0
MAIT T-cell nTPM: 23.5
Samples: 4
Max nTPM: 36.8
Min nTPM: 16.7
RHH5233_R3605
17.0
RHH5205_R3576
16.7
RHH5262_R3634
36.8
RHH5297_R3663
23.6
Memory CD4 T-cell TFH nTPM: 39.6
Samples: 4
Max nTPM: 70.8
Min nTPM: 21.8
RHH5300_R3666
24.6
RHH5236_R3608
70.8
RHH5265_R3637
41.3
RHH5208_R3579
21.8
Memory CD4 T-cell Th1 nTPM: 42.3
Samples: 4
Max nTPM: 68.8
Min nTPM: 24.9
RHH5210_R3581
24.9
RHH5302_R3668
68.8
RHH5238_R3610
36.5
RHH5267_R3639
38.8
Memory CD4 T-cell Th1/Th17 nTPM: 36.1
Samples: 4
Max nTPM: 38.1
Min nTPM: 33.4
RHH5303_R3669
37.9
RHH5211_R3582
38.1
RHH5239_R3611
34.8
RHH5268_R3640
33.4
Memory CD4 T-cell Th17 nTPM: 26.3
Samples: 4
Max nTPM: 30.0
Min nTPM: 24.3
RHH5304_R3670
24.3
RHH5212_R3583
30.0
RHH5240_R3612
24.8
RHH5269_R3641
26.0
Memory CD4 T-cell Th2 nTPM: 32.6
Samples: 4
Max nTPM: 36.8
Min nTPM: 26.2
RHH5305_R3671
35.9
RHH5213_R3584
26.2
RHH5241_R3613
36.8
RHH5270_R3642
31.6
Naive CD4 T-cell nTPM: 47.0
Samples: 4
Max nTPM: 64.1
Min nTPM: 39.3
RHH5306_R3672
41.7
RHH5214_R3585
64.1
RHH5242_R3614
42.8
RHH5271_R3643
39.3
Naive CD8 T-cell nTPM: 36.6
Samples: 4
Max nTPM: 40.9
Min nTPM: 32.4
RHH5201_R3572
32.4
RHH5229_R3601
40.9
RHH5258_R3630
33.7
RHH5287_R3659
39.3
Non-Vd2 gdTCR nTPM: 23.6
Samples: 4
Max nTPM: 28.7
Min nTPM: 19.2
RHH5235_R3607
19.2
RHH5264_R3636
21.5
RHH5207_R3578
25.0
RHH5299_R3665
28.7
T-reg nTPM: 46.2
Samples: 4
Max nTPM: 57.2
Min nTPM: 35.0
RHH5301_R3667
57.2
RHH5237_R3609
47.9
RHH5266_R3638
35.0
RHH5209_R3580
44.6
Terminal effector memory CD4 T-cell nTPM: 26.1
Samples: 2
Max nTPM: 27.2
Min nTPM: 25.0
RHH5243_R3615
25.0
RHH5272_R3644
27.2
Terminal effector memory CD8 T-cell nTPM: 29.4
Samples: 4
Max nTPM: 56.4
Min nTPM: 10.7
RHH5232_R3604
10.7
RHH5204_R3575
56.4
RHH5261_R3633
27.3
RHH5296_R3662
23.3
Vd2 gdTCR nTPM: 31.7
Samples: 4
Max nTPM: 37.7
Min nTPM: 24.5
RHH5234_R3606
29.6
RHH5206_R3577
37.7
RHH5263_R3635
24.5
RHH5298_R3664
34.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
