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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
455.3
nTPM
FANTOM5:
548.3
Scaled Tags Per Million
Pig:
127.4
nTPM
PONS - HPA Brain RNA-seq
Max nTPM
455.3
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 377.4
2301
Female, age 85, both hemispheres
422.3
2090
Male, age 80, both hemispheres
374.1
1984
Male, age 76, both hemispheres
373.2
2188
Female, age 91, both hemispheres
340.0
Dorsal cochlear nucleus nTPM: 455.3
2802
Male, age 74, right hemisphere
526.5
2058
Male, age 76, both hemispheres
486.6
2370
Male, age 61, both hemispheres
442.3
2378
Male, age 80, both hemispheres
441.4
2187
Female, age 91, both hemispheres
379.8
Dorsal tegmental nucleus nTPM: 392.9
2083
Male, age 80, both hemispheres
456.6
2326
Male, age 74, both hemispheres
435.6
1936
Male, age 76, left hemisphere
411.7
2358
Male, age 61, both hemispheres
267.6
Dorsolateral tegmental area nTPM: 404.1
2751
Female, age 85, both hemispheres
456.3
2654
Male, age 80, both hemispheres
450.4
2141
Male, age 76, both hemispheres
388.7
2360
Male, age 74, both hemispheres
368.5
2337
Male, age 61, both hemispheres
356.4
Kolliker-Fuse nucleus nTPM: 433.5
2315
Male, age 76, right hemisphere
576.7
2163
Male, age 80, both hemispheres
390.4
2793
Female, age 91, left hemisphere
333.5
Lateral lemniscal nuclei nTPM: 339.4
2169
Male, age 76, both hemispheres
367.5
2453
Male, age 74, right hemisphere
344.9
2036
Male, age 80, both hemispheres
335.9
2320
Female, age 91, left hemisphere
333.2
2746
Female, age 85, left hemisphere
315.4
Lateral parabrachial nucleus nTPM: 404.5
2792
Male, age 76, both hemispheres
477.1
2790
Male, age 61, both hemispheres
391.8
2139
Female, age 85, right hemisphere
377.7
2013
Male, age 80, both hemispheres
371.5
Lateral vestibular nucleus nTPM: 406.3
2311
Male, age 80, both hemispheres
417.9
2184
Male, age 76, both hemispheres
394.7
Locus coeruleus nTPM: 367.9
2317
Female, age 72, unknown
411.9
2014
Male, age 55, unknown
390.7
2788
Male, age 74, unknown
373.9
1980
Male, age 76, both hemispheres
368.1
2162
Male, age 80, both hemispheres
361.3
2123
Female, age 91, both hemispheres
350.4
2720
Male, age 74, both hemispheres
319.1
Medial parabrachial nucleus nTPM: 393.3
2463
Female, age 85, right hemisphere
410.6
2786
Male, age 76, both hemispheres
400.9
2170
Female, age 91, both hemispheres
395.5
2156
Male, age 61, both hemispheres
384.4
2854
Male, age 80, both hemispheres
375.3
Medial periolivary nuclei nTPM: 352.4
2791
Male, age 74, right hemisphere
413.6
2063
Male, age 76, both hemispheres
381.6
2458
Female, age 91, both hemispheres
329.7
2171
Female, age 85, both hemispheres
323.2
2081
Male, age 80, both hemispheres
313.8
Motor facial nucleus nTPM: 385.9
2795
Female, age 91, both hemispheres
541.8
2062
Male, age 76, both hemispheres
404.3
2365
Male, age 74, right hemisphere
388.9
2126
Male, age 61, both hemispheres
356.2
2697
Female, age 85, both hemispheres
316.4
2327
Male, age 80, both hemispheres
308.0
Motor trigeminal nucleus nTPM: 339.2
2309
Male, age 76, both hemispheres
371.2
2335
Male, age 61, both hemispheres
369.2
2560
Male, age 74, both hemispheres
341.8
2321
Female, age 91, both hemispheres
320.6
2079
Male, age 80, both hemispheres
293.0
Nuclei of the trapezoid body nTPM: 365.5
2368
Female, age 91, both hemispheres
433.9
1983
Male, age 76, both hemispheres
400.7
2735
Female, age 85, both hemispheres
343.2
2166
Male, age 80, both hemispheres
338.0
2159
Male, age 61, both hemispheres
311.7
Nucleus raphe magnus nTPM: 336.6
2051
Male, age 76, both hemispheres
400.5
2455
Male, age 74, both hemispheres
382.3
2328
Male, age 80, both hemispheres
360.4
2459
Female, age 91, both hemispheres
333.6
2160
Male, age 61, both hemispheres
279.6
2172
Female, age 85, both hemispheres
263.0
Paramedian reticular nucleus nTPM: 398.7
2057
Male, age 80, both hemispheres
439.3
2052
Male, age 76, both hemispheres
425.9
2313
Male, age 61, both hemispheres
391.3
2050
Female, age 85, both hemispheres
338.2
Pedunculopontine tegmental nucleus nTPM: 421.2
1921
Female, age 85, both hemispheres
433.6
2334
Male, age 80, both hemispheres
431.7
2338
Male, age 61, both hemispheres
398.2
Pontine nuclei nTPM: 335.3
1863
Male, age 55, unknown
408.9
2109
Female, age 72, unknown
375.8
2454
Male, age 74, left hemisphere
367.3
1968
Male, age 76, left hemisphere
358.8
2319
Female, age 91, both hemispheres
348.1
2115
Male, age 80, left hemisphere
281.8
2787
Female, age 85, both hemispheres
278.8
2727
Male, age 61, right hemisphere
262.8
Pontine raphe nucleus nTPM: 383.6
2853
Male, age 76, midline
433.3
2122
Female, age 85, midline
333.9
Posteroventral cochlear nucleus nTPM: 418.5
2371
Male, age 61, both hemispheres
533.0
2070
Male, age 76, both hemispheres
458.5
2752
Female, age 85, both hemispheres
381.3
2341
Male, age 80, both hemispheres
376.7
2135
Female, age 91, both hemispheres
343.2
Principal sensory trigeminal nucleus nTPM: 335.8
2324
Male, age 76, both hemispheres
456.0
2008
Male, age 80, left hemisphere
303.1
2367
Female, age 91, left hemisphere
294.2
2158
Male, age 61, both hemispheres
289.8
Reticular pontine nucleus, caudal nTPM: 357.2
2092
Male, age 76, both hemispheres
400.2
2457
Female, age 91, both hemispheres
375.9
2559
Male, age 74, both hemispheres
350.6
2332
Male, age 80, right hemisphere
301.9
Reticular pontine nucleus, oral nTPM: 379.7
1939
Male, age 80, both hemispheres
458.1
2167
Male, age 76, both hemispheres
409.7
2366
Female, age 91, both hemispheres
361.9
2012
Female, age 85, both hemispheres
356.4
2361
Male, age 74, both hemispheres
312.4
Reticulotegmental nucleus nTPM: 401.1
2333
Male, age 80, both hemispheres
437.6
2322
Female, age 91, both hemispheres
437.5
2452
Male, age 74, both hemispheres
373.7
2325
Male, age 76, both hemispheres
355.8
Spinal trigeminal nucleus, oral nTPM: 386.4
1978
Male, age 76, both hemispheres
421.8
2737
Female, age 85, both hemispheres
376.0
2164
Male, age 80, both hemispheres
361.5
Subcoeruleus area nTPM: 396.3
2369
Female, age 85, left hemisphere
455.1
2323
Female, age 91, left hemisphere
410.4
1958
Male, age 80, both hemispheres
382.4
2451
Male, age 74, both hemispheres
382.0
2089
Male, age 76, left hemisphere
351.6
Superior olive nTPM: 349.6
2364
Male, age 74, right hemisphere
396.1
2020
Male, age 76, both hemispheres
373.2
2329
Male, age 80, right hemisphere
339.3
2561
Female, age 91, both hemispheres
329.9
1875
Female, age 85, both hemispheres
309.2
Ventral periolivary nuclei nTPM: 350.4
2023
Male, age 76, both hemispheres
375.5
2165
Male, age 80, both hemispheres
373.8
2130
Female, age 85, both hemispheres
372.4
2794
Female, age 91, left hemisphere
279.9
Ventrolateral tegmental area, A5 NE cell group nTPM: 376.9
2359
Male, age 61, both hemispheres
432.0
2456
Female, age 91, both hemispheres
397.5
1959
Male, age 76, both hemispheres
366.4
2840
Female, age 85, both hemispheres
361.6
2161
Male, age 80, both hemispheres
355.3
2449
Male, age 74, both hemispheres
348.3
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
