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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
261.9
nTPM
Monaco:
35.5
nTPM
Schmiedel:
70.1
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
261.9
HPA sample
nTPM
gdT-cell nTPM: 208.1
Samples: 6
Max nTPM: 292.4
Min nTPM: 170.5
P10809_1007
172.3
P10809_1022
211.7
P10809_1041
292.4
P10809_1060
170.5
P10809_1077
203.8
P10809_1098
198.1
MAIT T-cell nTPM: 208.5
Samples: 6
Max nTPM: 262.3
Min nTPM: 134.6
P10809_1006
134.6
P10809_1024
219.9
P10809_1043
227.9
P10809_1062
218.3
P10809_1083
187.7
P10809_1097
262.3
Memory CD4 T-cell nTPM: 214.3
Samples: 6
Max nTPM: 246.7
Min nTPM: 166.0
P10809_1014
166.0
P10809_1026
246.7
P10809_1045
213.6
P10809_1064
237.0
P10809_1086
201.1
P10809_1113
221.4
Memory CD8 T-cell nTPM: 209.3
Samples: 5
Max nTPM: 262.7
Min nTPM: 147.2
P10809_1012
147.2
P10809_1027
262.7
P10809_1046
217.3
P10809_1065
203.7
P10809_1111
215.5
Naive CD4 T-cell nTPM: 178.6
Samples: 6
Max nTPM: 245.8
Min nTPM: 115.6
P10809_1015
115.6
P10809_1030
155.7
P10809_1049
245.8
P10809_1068
189.0
P10809_1085
184.9
P10809_1112
180.3
Naive CD8 T-cell nTPM: 197.6
Samples: 6
Max nTPM: 225.4
Min nTPM: 145.3
P10809_1016
145.3
P10809_1031
189.8
P10809_1050
209.8
P10809_1069
225.4
P10809_1087
224.3
P10809_1110
190.9
T-reg nTPM: 261.9
Samples: 6
Max nTPM: 325.4
Min nTPM: 221.2
P10809_1018
221.2
P10809_1037
266.9
P10809_1056
325.4
P10809_1075
232.2
P10809_1094
252.5
P10809_1106
273.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
35.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 30.9
Samples: 4
Max nTPM: 45.4
Min nTPM: 19.4
RHH5202_R3573
33.2
RHH5230_R3602
19.4
RHH5259_R3631
45.4
RHH5288_R3660
25.4
Effector memory CD8 T-cell nTPM: 23.0
Samples: 4
Max nTPM: 28.6
Min nTPM: 20.2
RHH5203_R3574
21.7
RHH5231_R3603
21.4
RHH5260_R3632
28.6
RHH5289_R3661
20.2
MAIT T-cell nTPM: 24.0
Samples: 4
Max nTPM: 33.1
Min nTPM: 13.0
RHH5233_R3605
17.6
RHH5205_R3576
32.3
RHH5262_R3634
33.1
RHH5297_R3663
13.0
Memory CD4 T-cell TFH nTPM: 25.2
Samples: 4
Max nTPM: 33.0
Min nTPM: 16.4
RHH5300_R3666
16.4
RHH5236_R3608
27.6
RHH5265_R3637
23.9
RHH5208_R3579
33.0
Memory CD4 T-cell Th1 nTPM: 30.7
Samples: 4
Max nTPM: 52.4
Min nTPM: 16.4
RHH5210_R3581
16.4
RHH5302_R3668
24.9
RHH5238_R3610
52.4
RHH5267_R3639
29.2
Memory CD4 T-cell Th1/Th17 nTPM: 27.1
Samples: 4
Max nTPM: 36.2
Min nTPM: 14.7
RHH5303_R3669
14.7
RHH5211_R3582
23.9
RHH5239_R3611
36.2
RHH5268_R3640
33.4
Memory CD4 T-cell Th17 nTPM: 33.2
Samples: 4
Max nTPM: 43.1
Min nTPM: 22.9
RHH5304_R3670
43.1
RHH5212_R3583
37.0
RHH5240_R3612
29.9
RHH5269_R3641
22.9
Memory CD4 T-cell Th2 nTPM: 25.3
Samples: 4
Max nTPM: 33.3
Min nTPM: 12.5
RHH5305_R3671
33.3
RHH5213_R3584
31.8
RHH5241_R3613
12.5
RHH5270_R3642
23.7
Naive CD4 T-cell nTPM: 27.9
Samples: 4
Max nTPM: 33.0
Min nTPM: 22.7
RHH5306_R3672
24.3
RHH5214_R3585
31.7
RHH5242_R3614
22.7
RHH5271_R3643
33.0
Naive CD8 T-cell nTPM: 30.6
Samples: 4
Max nTPM: 45.4
Min nTPM: 24.2
RHH5201_R3572
45.4
RHH5229_R3601
27.8
RHH5258_R3630
24.2
RHH5287_R3659
24.9
Non-Vd2 gdTCR nTPM: 28.3
Samples: 4
Max nTPM: 33.6
Min nTPM: 24.8
RHH5235_R3607
26.5
RHH5264_R3636
24.8
RHH5207_R3578
28.3
RHH5299_R3665
33.6
T-reg nTPM: 26.1
Samples: 4
Max nTPM: 30.0
Min nTPM: 17.0
RHH5301_R3667
29.6
RHH5237_R3609
17.0
RHH5266_R3638
27.7
RHH5209_R3580
30.0
Terminal effector memory CD4 T-cell nTPM: 25.3
Samples: 2
Max nTPM: 31.9
Min nTPM: 18.6
RHH5243_R3615
31.9
RHH5272_R3644
18.6
Terminal effector memory CD8 T-cell nTPM: 35.5
Samples: 4
Max nTPM: 58.7
Min nTPM: 24.1
RHH5232_R3604
24.1
RHH5204_R3575
58.7
RHH5261_R3633
34.3
RHH5296_R3662
24.8
Vd2 gdTCR nTPM: 35.2
Samples: 4
Max nTPM: 72.7
Min nTPM: 20.0
RHH5234_R3606
25.1
RHH5206_R3577
72.7
RHH5263_R3635
22.9
RHH5298_R3664
20.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
