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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
1098.9
nTPM
Monaco:
105.1
nTPM
Schmiedel:
613.3
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
1098.9
HPA sample
nTPM
gdT-cell nTPM: 606.8
Samples: 6
Max nTPM: 810.1
Min nTPM: 470.8
P10809_1007
810.1
P10809_1022
498.3
P10809_1041
778.9
P10809_1060
470.8
P10809_1077
566.6
P10809_1098
516.0
MAIT T-cell nTPM: 839.9
Samples: 6
Max nTPM: 958.0
Min nTPM: 654.4
P10809_1006
878.0
P10809_1024
792.8
P10809_1043
958.0
P10809_1062
901.4
P10809_1083
654.4
P10809_1097
854.5
Memory CD4 T-cell nTPM: 960.3
Samples: 6
Max nTPM: 1237.3
Min nTPM: 651.8
P10809_1014
1136.8
P10809_1026
1237.3
P10809_1045
1002.4
P10809_1064
694.0
P10809_1086
651.8
P10809_1113
1039.2
Memory CD8 T-cell nTPM: 798.4
Samples: 5
Max nTPM: 917.5
Min nTPM: 632.0
P10809_1012
917.5
P10809_1027
820.9
P10809_1046
914.3
P10809_1065
632.0
P10809_1111
707.3
Naive CD4 T-cell nTPM: 1098.9
Samples: 6
Max nTPM: 1486.6
Min nTPM: 719.9
P10809_1015
1486.6
P10809_1030
1347.3
P10809_1049
719.9
P10809_1068
1144.8
P10809_1085
752.6
P10809_1112
1142.3
Naive CD8 T-cell nTPM: 1000.0
Samples: 6
Max nTPM: 1912.0
Min nTPM: 482.0
P10809_1016
1912.0
P10809_1031
1021.2
P10809_1050
828.8
P10809_1069
869.3
P10809_1087
482.0
P10809_1110
886.5
T-reg nTPM: 825.4
Samples: 6
Max nTPM: 1074.7
Min nTPM: 636.8
P10809_1018
789.8
P10809_1037
849.6
P10809_1056
636.8
P10809_1075
803.9
P10809_1094
1074.7
P10809_1106
797.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
105.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 86.0
Samples: 4
Max nTPM: 144.0
Min nTPM: 35.2
RHH5202_R3573
35.2
RHH5230_R3602
100.0
RHH5259_R3631
144.0
RHH5288_R3660
64.8
Effector memory CD8 T-cell nTPM: 35.5
Samples: 4
Max nTPM: 42.4
Min nTPM: 32.6
RHH5203_R3574
32.6
RHH5231_R3603
32.6
RHH5260_R3632
42.4
RHH5289_R3661
34.4
MAIT T-cell nTPM: 60.4
Samples: 4
Max nTPM: 86.6
Min nTPM: 27.8
RHH5233_R3605
27.8
RHH5205_R3576
86.6
RHH5262_R3634
81.4
RHH5297_R3663
45.6
Memory CD4 T-cell TFH nTPM: 38.5
Samples: 4
Max nTPM: 61.3
Min nTPM: 23.4
RHH5300_R3666
34.8
RHH5236_R3608
23.4
RHH5265_R3637
61.3
RHH5208_R3579
34.3
Memory CD4 T-cell Th1 nTPM: 105.1
Samples: 4
Max nTPM: 222.4
Min nTPM: 40.0
RHH5210_R3581
40.0
RHH5302_R3668
60.8
RHH5238_R3610
222.4
RHH5267_R3639
97.1
Memory CD4 T-cell Th1/Th17 nTPM: 73.6
Samples: 4
Max nTPM: 117.7
Min nTPM: 29.0
RHH5303_R3669
29.0
RHH5211_R3582
55.6
RHH5239_R3611
117.7
RHH5268_R3640
92.2
Memory CD4 T-cell Th17 nTPM: 68.4
Samples: 4
Max nTPM: 90.4
Min nTPM: 42.0
RHH5304_R3670
90.4
RHH5212_R3583
42.0
RHH5240_R3612
63.1
RHH5269_R3641
78.0
Memory CD4 T-cell Th2 nTPM: 75.1
Samples: 4
Max nTPM: 124.2
Min nTPM: 46.2
RHH5305_R3671
124.2
RHH5213_R3584
56.4
RHH5241_R3613
46.2
RHH5270_R3642
73.7
Naive CD4 T-cell nTPM: 88.5
Samples: 4
Max nTPM: 118.0
Min nTPM: 54.0
RHH5306_R3672
118.0
RHH5214_R3585
54.0
RHH5242_R3614
73.8
RHH5271_R3643
108.0
Naive CD8 T-cell nTPM: 95.9
Samples: 4
Max nTPM: 149.4
Min nTPM: 44.6
RHH5201_R3572
61.5
RHH5229_R3601
128.0
RHH5258_R3630
44.6
RHH5287_R3659
149.4
Non-Vd2 gdTCR nTPM: 38.8
Samples: 4
Max nTPM: 71.6
Min nTPM: 23.0
RHH5235_R3607
71.6
RHH5264_R3636
30.9
RHH5207_R3578
23.0
RHH5299_R3665
29.7
T-reg nTPM: 48.0
Samples: 4
Max nTPM: 78.3
Min nTPM: 18.7
RHH5301_R3667
50.5
RHH5237_R3609
18.7
RHH5266_R3638
78.3
RHH5209_R3580
44.4
Terminal effector memory CD4 T-cell nTPM: 40.9
Samples: 2
Max nTPM: 52.3
Min nTPM: 29.4
RHH5243_R3615
52.3
RHH5272_R3644
29.4
Terminal effector memory CD8 T-cell nTPM: 45.9
Samples: 4
Max nTPM: 71.0
Min nTPM: 25.6
RHH5232_R3604
25.6
RHH5204_R3575
57.6
RHH5261_R3633
71.0
RHH5296_R3662
29.5
Vd2 gdTCR nTPM: 66.9
Samples: 4
Max nTPM: 76.5
Min nTPM: 52.0
RHH5234_R3606
52.0
RHH5206_R3577
76.5
RHH5263_R3635
76.2
RHH5298_R3664
63.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
