We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
943.6
nTPM
Monaco:
1283.3
nTPM
Schmiedel:
555.6
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
943.6
HPA sample
nTPM
gdT-cell nTPM: 943.6
Samples: 6
Max nTPM: 1099.8
Min nTPM: 784.6
P10809_1007
975.2
P10809_1022
966.0
P10809_1041
1099.8
P10809_1060
784.6
P10809_1077
854.3
P10809_1098
981.8
MAIT T-cell nTPM: 927.9
Samples: 6
Max nTPM: 1096.9
Min nTPM: 758.1
P10809_1006
965.1
P10809_1024
1096.9
P10809_1043
758.1
P10809_1062
879.2
P10809_1083
833.1
P10809_1097
1035.2
Memory CD4 T-cell nTPM: 250.8
Samples: 6
Max nTPM: 528.0
Min nTPM: 80.9
P10809_1014
127.9
P10809_1026
116.9
P10809_1045
179.5
P10809_1064
528.0
P10809_1086
471.6
P10809_1113
80.9
Memory CD8 T-cell nTPM: 922.7
Samples: 5
Max nTPM: 1166.5
Min nTPM: 658.5
P10809_1012
658.5
P10809_1027
1138.5
P10809_1046
824.6
P10809_1065
1166.5
P10809_1111
825.6
Naive CD4 T-cell nTPM: 48.7
Samples: 6
Max nTPM: 198.7
Min nTPM: 5.1
P10809_1015
20.8
P10809_1030
5.1
P10809_1049
21.6
P10809_1068
38.8
P10809_1085
198.7
P10809_1112
7.0
Naive CD8 T-cell nTPM: 495.6
Samples: 6
Max nTPM: 1015.5
Min nTPM: 86.6
P10809_1016
86.6
P10809_1031
402.2
P10809_1050
464.9
P10809_1069
809.2
P10809_1087
1015.5
P10809_1110
194.9
T-reg nTPM: 33.2
Samples: 6
Max nTPM: 70.0
Min nTPM: 15.6
P10809_1018
33.7
P10809_1037
70.0
P10809_1056
30.1
P10809_1075
27.7
P10809_1094
22.2
P10809_1106
15.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
1283.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 194.3
Samples: 4
Max nTPM: 324.8
Min nTPM: 91.8
RHH5202_R3573
91.8
RHH5230_R3602
129.6
RHH5259_R3631
230.8
RHH5288_R3660
324.8
Effector memory CD8 T-cell nTPM: 856.8
Samples: 4
Max nTPM: 1011.4
Min nTPM: 639.9
RHH5203_R3574
995.8
RHH5231_R3603
1011.4
RHH5260_R3632
780.1
RHH5289_R3661
639.9
MAIT T-cell nTPM: 769.3
Samples: 4
Max nTPM: 1171.9
Min nTPM: 475.7
RHH5233_R3605
808.6
RHH5205_R3576
475.7
RHH5262_R3634
620.8
RHH5297_R3663
1171.9
Memory CD4 T-cell TFH nTPM: 49.5
Samples: 4
Max nTPM: 86.0
Min nTPM: 36.8
RHH5300_R3666
37.6
RHH5236_R3608
86.0
RHH5265_R3637
36.8
RHH5208_R3579
37.7
Memory CD4 T-cell Th1 nTPM: 229.9
Samples: 4
Max nTPM: 321.4
Min nTPM: 141.5
RHH5210_R3581
141.5
RHH5302_R3668
321.4
RHH5238_R3610
239.3
RHH5267_R3639
217.2
Memory CD4 T-cell Th1/Th17 nTPM: 254.4
Samples: 4
Max nTPM: 494.8
Min nTPM: 89.3
RHH5303_R3669
494.8
RHH5211_R3582
200.4
RHH5239_R3611
89.3
RHH5268_R3640
233.0
Memory CD4 T-cell Th17 nTPM: 83.8
Samples: 4
Max nTPM: 189.2
Min nTPM: 20.6
RHH5304_R3670
189.2
RHH5212_R3583
79.5
RHH5240_R3612
20.6
RHH5269_R3641
45.7
Memory CD4 T-cell Th2 nTPM: 29.1
Samples: 4
Max nTPM: 37.4
Min nTPM: 24.5
RHH5305_R3671
37.4
RHH5213_R3584
27.7
RHH5241_R3613
24.5
RHH5270_R3642
26.8
Naive CD4 T-cell nTPM: 31.8
Samples: 4
Max nTPM: 51.3
Min nTPM: 19.4
RHH5306_R3672
19.4
RHH5214_R3585
51.3
RHH5242_R3614
33.5
RHH5271_R3643
22.8
Naive CD8 T-cell nTPM: 6.6
Samples: 4
Max nTPM: 8.4
Min nTPM: 3.5
RHH5201_R3572
3.5
RHH5229_R3601
6.6
RHH5258_R3630
7.8
RHH5287_R3659
8.4
Non-Vd2 gdTCR nTPM: 960.2
Samples: 4
Max nTPM: 1517.7
Min nTPM: 501.4
RHH5235_R3607
501.4
RHH5264_R3636
1067.6
RHH5207_R3578
753.9
RHH5299_R3665
1517.7
T-reg nTPM: 44.5
Samples: 4
Max nTPM: 59.2
Min nTPM: 27.5
RHH5301_R3667
56.6
RHH5237_R3609
59.2
RHH5266_R3638
27.5
RHH5209_R3580
34.6
Terminal effector memory CD4 T-cell nTPM: 619.3
Samples: 2
Max nTPM: 819.7
Min nTPM: 418.9
RHH5243_R3615
418.9
RHH5272_R3644
819.7
Terminal effector memory CD8 T-cell nTPM: 1283.4
Samples: 4
Max nTPM: 1905.9
Min nTPM: 805.9
RHH5232_R3604
805.9
RHH5204_R3575
1905.9
RHH5261_R3633
948.7
RHH5296_R3662
1472.9
Vd2 gdTCR nTPM: 1156.2
Samples: 4
Max nTPM: 1788.9
Min nTPM: 694.9
RHH5234_R3606
716.8
RHH5206_R3577
1788.9
RHH5263_R3635
694.9
RHH5298_R3664
1424.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
