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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
21.7
nTPM
HPA Brain:
150.1
nTPM
GTEx:
21.7
nTPM
FANTOM5:
225.8
Scaled Tags Per Million
Pig:
103.4
nTPM
Mouse:
34.5
nTPM
Allen mouse:
1.5
Expression energy
MIDBRAIN - HPA Brain RNA-seq
Max nTPM
150.1
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 117.5
1830
Male, age 51, unknown
131.1
1833
Male, age 53, unknown
129.9
2586
Male, age 75, left hemisphere
120.1
2828
Female, age 72, unknown
118.7
2019
Male, age 18, unknown
117.2
1870
Female, age 42, unknown
117.0
2411
Female, age 72, unknown
116.9
2666
Male, age 74, left hemisphere
110.9
1827
Male, age 72, unknown
108.6
2219
Male, age 76, both hemispheres
104.9
Dorsal raphe nucleus nTPM: 104.2
2016
Female, age 72, unknown
124.3
1828
Male, age 53, unknown
110.4
2047
Male, age 72, unknown
100.0
2750
Male, age 76, both hemispheres
99.7
2298
Female, age 72, unknown
86.5
Inferior colliculus nTPM: 116.8
2849
Male, age 72, unknown
131.6
1848
Female, age 42, unknown
128.7
1890
Male, age 53, unknown
106.5
2097
Female, age 72, unknown
100.4
Median raphe nucleus nTPM: 89.4
2220
Male, age 76, midline
89.4
Periaquaductal grey, anterior nTPM: 139.8
1947
Male, age 18, unknown
181.3
2502
Female, age 75, unknown
120.5
1795
Male, age 51, unknown
117.5
Periaquaductal grey, dorsal nTPM: 96.5
2464
Female, age 72, unknown
110.7
1831
Male, age 72, unknown
94.4
1840
Male, age 53, unknown
92.2
2850
Male, age 76, both hemispheres
89.0
Periaquaductal grey, lateral nTPM: 99.8
2053
Male, age 18, unknown
105.2
2272
Male, age 74, both hemispheres
103.8
2140
Male, age 76, both hemispheres
90.4
Pretectal area nTPM: 108.1
1817
Female, age 42, unknown
130.4
2407
Male, age 75, both hemispheres
123.6
2007
Male, age 72, unknown
117.9
1815
Male, age 53, unknown
115.1
2825
Male, age 18, unknown
109.6
2316
Male, age 76, right hemisphere
106.2
2667
Female, age 75, unknown
105.0
2273
Male, age 74, both hemispheres
104.0
2224
Female, age 72, unknown
101.4
1944
Female, age 72, unknown
88.5
1816
Male, age 51, unknown
86.9
Red nucleus nTPM: 150.1
1954
Female, age 42, unknown
178.0
1865
Male, age 51, unknown
174.0
1821
Female, age 72, unknown
167.9
2503
Female, age 72, unknown
156.8
1904
Male, age 53, unknown
156.5
2588
Male, age 74, left hemisphere
154.4
2769
Male, age 72, unknown
148.4
2227
Male, age 72, unknown
147.9
2725
Female, age 75, unknown
145.1
2823
Male, age 76, right hemisphere
128.6
2584
Male, age 75, left hemisphere
125.7
2785
Male, age 18, unknown
117.6
Substantia nigra nTPM: 113.0
2583
Male, age 75, right hemisphere
128.9
2699
Male, age 18, unknown
127.3
2665
Male, age 74, both hemispheres
123.8
2590
Female, age 75, unknown
115.7
1889
Female, age 72, unknown
114.4
1851
Male, age 51, unknown
111.9
2241
Male, age 72, unknown
106.0
1941
Male, age 53, unknown
103.3
2409
Female, age 72, unknown
102.5
1916
Female, age 42, unknown
95.8
Superior colliculus nTPM: 114.7
2664
Male, age 75, both hemispheres
136.6
2668
Female, age 75, unknown
131.7
1839
Male, age 51, unknown
127.8
2587
Male, age 74, left hemisphere
122.2
1895
Male, age 76, right hemisphere
115.3
1913
Female, age 42, unknown
113.1
1995
Male, age 72, unknown
111.5
1796
Male, age 53, unknown
109.4
2087
Female, age 72, unknown
90.6
2261
Male, age 18, unknown
89.0
Ventral tegmental area nTPM: 104.4
2410
Female, age 72, unknown
125.9
2223
Female, age 72, unknown
115.4
1915
Female, age 42, unknown
102.4
1942
Male, age 51, unknown
101.8
2021
Male, age 53, unknown
100.0
2218
Male, age 76, both hemispheres
81.2
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
21.7
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 21.7
Samples: 139
Max nTPM: 40.3
Min nTPM: 9.3
Std nTPM: 5.9
Median nTPM: 21.6
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
40.3
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
37.3
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
34.3
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
33.6
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
33.6
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
33.0
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
32.3
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
32.3
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
31.3
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
31.2
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
30.0
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
29.9
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
29.8
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
29.7
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
29.2
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
28.8
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
28.8
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
28.5
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
28.4
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
28.3
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
28.1
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
28.0
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
28.0
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
27.8
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
27.7
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
27.4
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
27.2
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
27.1
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
26.9
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
26.9
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
26.6
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
26.3
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
26.1
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
25.8
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
25.2
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
25.1
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
25.0
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
24.9
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
24.9
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
24.3
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
24.2
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
24.2
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
24.2
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
24.0
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
23.8
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
23.8
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
23.7
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
23.7
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
23.6
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
23.5
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
23.3
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
23.2
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
23.1
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
23.1
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
22.9
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
22.9
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
22.8
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
22.8
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
22.4
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
22.3
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
22.3
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
22.2
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
22.2
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
22.1
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
22.1
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
22.0
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
21.7
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
21.6
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
21.6
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
21.6
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
21.5
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
21.2
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
21.2
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
21.1
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
21.1
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
21.1
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
21.0
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
20.9
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
20.8
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
20.7
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
20.7
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
20.7
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
20.6
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
20.5
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
20.2
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
20.1
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
20.1
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
20.0
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
19.6
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
19.6
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
19.6
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
19.5
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
19.4
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
19.2
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
19.1
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
19.1
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
18.9
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
18.4
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
18.4
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
18.2
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
18.0
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
17.9
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
17.4
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
17.4
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
17.3
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
17.3
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
17.1
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
17.0
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
17.0
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
17.0
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
16.9
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
16.8
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
16.8
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
16.3
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
16.2
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
15.6
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
15.2
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
15.0
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
14.8
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
14.7
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
14.6
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
14.4
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
14.4
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
14.4
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
14.3
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
14.0
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
13.5
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
13.4
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
13.1
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
12.6
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
12.5
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
11.9
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
11.6
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
11.2
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
11.2
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
10.6
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
10.1
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
9.6
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
9.3
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
34.5
Mouse sample
Sample description
nTPM
Midbrain nTPM: 34.5
Samples: 4
Max nTPM: 38.3
Min nTPM: 31.1
Sample A
Male
31.1
Sample B
Male
38.3
Sample C
Female
34.7
Sample D
Female
34.0
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.