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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
17.1
nTPM
Monaco:
212.7
nTPM
Schmiedel:
395.2
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
17.1
HPA sample
nTPM
gdT-cell nTPM: 11.8
Samples: 6
Max nTPM: 21.6
Min nTPM: 4.4
P10809_1007
9.8
P10809_1022
14.1
P10809_1041
8.8
P10809_1060
21.6
P10809_1077
12.1
P10809_1098
4.4
MAIT T-cell nTPM: 14.1
Samples: 6
Max nTPM: 18.0
Min nTPM: 10.0
P10809_1006
18.0
P10809_1024
17.8
P10809_1043
12.0
P10809_1062
13.9
P10809_1083
10.0
P10809_1097
12.7
Memory CD4 T-cell nTPM: 14.1
Samples: 6
Max nTPM: 20.7
Min nTPM: 9.8
P10809_1014
20.7
P10809_1026
16.3
P10809_1045
15.3
P10809_1064
11.4
P10809_1086
10.9
P10809_1113
9.8
Memory CD8 T-cell nTPM: 9.5
Samples: 5
Max nTPM: 15.6
Min nTPM: 4.7
P10809_1012
8.9
P10809_1027
15.6
P10809_1046
10.0
P10809_1065
8.5
P10809_1111
4.7
Naive CD4 T-cell nTPM: 17.1
Samples: 6
Max nTPM: 20.2
Min nTPM: 10.3
P10809_1015
19.3
P10809_1030
16.6
P10809_1049
19.6
P10809_1068
20.2
P10809_1085
16.7
P10809_1112
10.3
Naive CD8 T-cell nTPM: 12.1
Samples: 6
Max nTPM: 16.7
Min nTPM: 7.1
P10809_1016
11.7
P10809_1031
16.7
P10809_1050
14.8
P10809_1069
12.7
P10809_1087
7.1
P10809_1110
9.4
T-reg nTPM: 10.3
Samples: 6
Max nTPM: 17.3
Min nTPM: 6.7
P10809_1018
7.8
P10809_1037
9.3
P10809_1056
12.9
P10809_1075
17.3
P10809_1094
6.7
P10809_1106
7.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
212.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 212.7
Samples: 4
Max nTPM: 361.8
Min nTPM: 139.7
RHH5202_R3573
361.8
RHH5230_R3602
178.5
RHH5259_R3631
170.7
RHH5288_R3660
139.7
Effector memory CD8 T-cell nTPM: 183.6
Samples: 4
Max nTPM: 299.7
Min nTPM: 124.5
RHH5203_R3574
299.7
RHH5231_R3603
150.5
RHH5260_R3632
124.5
RHH5289_R3661
159.5
MAIT T-cell nTPM: 150.4
Samples: 4
Max nTPM: 277.6
Min nTPM: 79.7
RHH5233_R3605
123.8
RHH5205_R3576
277.6
RHH5262_R3634
120.6
RHH5297_R3663
79.7
Memory CD4 T-cell TFH nTPM: 156.8
Samples: 4
Max nTPM: 291.3
Min nTPM: 99.3
RHH5300_R3666
134.9
RHH5236_R3608
99.3
RHH5265_R3637
101.8
RHH5208_R3579
291.3
Memory CD4 T-cell Th1 nTPM: 156.5
Samples: 4
Max nTPM: 214.0
Min nTPM: 118.2
RHH5210_R3581
147.5
RHH5302_R3668
118.2
RHH5238_R3610
214.0
RHH5267_R3639
146.3
Memory CD4 T-cell Th1/Th17 nTPM: 170.2
Samples: 4
Max nTPM: 197.1
Min nTPM: 123.8
RHH5303_R3669
123.8
RHH5211_R3582
197.1
RHH5239_R3611
166.8
RHH5268_R3640
192.9
Memory CD4 T-cell Th17 nTPM: 118.0
Samples: 4
Max nTPM: 142.6
Min nTPM: 75.9
RHH5304_R3670
75.9
RHH5212_R3583
142.5
RHH5240_R3612
111.0
RHH5269_R3641
142.6
Memory CD4 T-cell Th2 nTPM: 166.9
Samples: 4
Max nTPM: 228.4
Min nTPM: 114.2
RHH5305_R3671
114.2
RHH5213_R3584
228.4
RHH5241_R3613
190.3
RHH5270_R3642
134.5
Naive CD4 T-cell nTPM: 93.4
Samples: 4
Max nTPM: 125.4
Min nTPM: 79.1
RHH5306_R3672
84.4
RHH5214_R3585
125.4
RHH5242_R3614
84.6
RHH5271_R3643
79.1
Naive CD8 T-cell nTPM: 81.3
Samples: 4
Max nTPM: 106.2
Min nTPM: 42.7
RHH5201_R3572
106.2
RHH5229_R3601
91.6
RHH5258_R3630
84.6
RHH5287_R3659
42.7
Non-Vd2 gdTCR nTPM: 173.6
Samples: 4
Max nTPM: 280.0
Min nTPM: 112.4
RHH5235_R3607
280.0
RHH5264_R3636
112.4
RHH5207_R3578
184.4
RHH5299_R3665
117.6
T-reg nTPM: 159.9
Samples: 4
Max nTPM: 229.9
Min nTPM: 105.9
RHH5301_R3667
105.9
RHH5237_R3609
178.6
RHH5266_R3638
125.2
RHH5209_R3580
229.9
Terminal effector memory CD4 T-cell nTPM: 108.1
Samples: 2
Max nTPM: 111.2
Min nTPM: 104.9
RHH5243_R3615
104.9
RHH5272_R3644
111.2
Terminal effector memory CD8 T-cell nTPM: 180.2
Samples: 4
Max nTPM: 306.2
Min nTPM: 96.7
RHH5232_R3604
156.9
RHH5204_R3575
306.2
RHH5261_R3633
161.1
RHH5296_R3662
96.7
Vd2 gdTCR nTPM: 206.2
Samples: 4
Max nTPM: 253.1
Min nTPM: 167.0
RHH5234_R3606
236.9
RHH5206_R3577
253.1
RHH5263_R3635
167.0
RHH5298_R3664
167.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
