HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:11.4 nTPM
HPA Brain:43.5 nTPM
GTEx:11.4 nTPM
FANTOM5:50.9 Scaled Tags Per Million
Pig:53.3 nTPM
Mouse:37.0 nTPM
Allen mouse:12.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA036393Antibody HPA064556Antibody CAB007789
Glial cells Not detectedNot detectedNot detected
Neuronal cells LowNot detectedLow







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 43.5
Sample id Sample description nTPM
Hippocampus
nTPM: 30.6
1898 Male, age 80, left hemisphere 35.0
1855 Male, age 76, left hemisphere 31.7
1911 Female, age 85, right hemisphere 31.3
2621 Female, age 67, right hemisphere 30.0
2529 Female, age 94, left hemisphere 27.8
2148 Female, age 91, left hemisphere 27.6
Dentate gyrus
nTPM: 32.7
1927 Female, age 91, both hemispheres 40.3
2246 Female, age 85, both hemispheres 35.1
2531 Female, age 67, both hemispheres 33.3
2528 Male, age 74, both hemispheres 32.0
2010 Male, age 76, both hemispheres 30.1
2530 Female, age 94, left hemisphere 25.5
Entorhinal gyrus
nTPM: 35.0
1938 Female, age 85, left hemisphere 40.4
2764 Male, age 80, right hemisphere 36.4
1787 Male, age 76, left hemisphere 34.8
2613 Female, age 94, left hemisphere 34.6
2117 Female, age 91, right hemisphere 33.5
2686 Male, age 75, right hemisphere 30.4
Hippocampus, CA1
nTPM: 34.3
2045 Male, age 76, both hemispheres 44.3
1873 Female, age 85, both hemispheres 35.4
2749 Male, age 80, left hemisphere 32.5
2082 Female, age 91, right hemisphere 29.9
2527 Male, age 74, both hemispheres 29.3
Hippocampus, CA2
nTPM: 31.5
1892 Male, age 76, both hemispheres 39.8
1963 Male, age 80, left hemisphere 31.7
2113 Female, age 91, right hemisphere 30.9
2249 Male, age 74, both hemispheres 30.0
1940 Female, age 85, left hemisphere 29.1
2437 Female, age 94, left hemisphere 27.8
Hippocampus, CA3
nTPM: 31.8
1891 Female, age 85, both hemispheres 35.3
1867 Male, age 76, both hemispheres 34.6
2137 Male, age 80, left hemisphere 34.5
2436 Male, age 74, both hemispheres 30.7
2620 Female, age 94, left hemisphere 28.2
2861 Female, age 67, both hemispheres 27.5
Parahippocampal cortex
nTPM: 35.8
1850 Male, age 80, both hemispheres 47.2
2693 Female, age 94, both hemispheres 42.0
1933 Female, age 85, both hemispheres 40.3
1990 Female, age 91, right hemisphere 37.7
2532 Female, age 72, left hemisphere 35.8
2250 Female, age 67, right hemisphere 34.3
2245 Female, age 91, both hemispheres 31.5
2692 Male, age 74, both hemispheres 31.3
2018 Male, age 76, both hemispheres 29.7
2622 Female, age 67, right hemisphere 28.3
Perirhinal gyrus
nTPM: 43.5
2848 Male, age 76, right hemisphere 46.3
1794 Male, age 80, right hemisphere 45.8
1841 Female, age 85, right hemisphere 45.7
1847 Female, age 91, left hemisphere 42.2
2521 Female, age 94, right hemisphere 37.4
Subiculum
nTPM: 32.2
1977 Female, age 85, both hemispheres 36.2
2438 Female, age 94, left hemisphere 32.6
2729 Female, age 91, right hemisphere 32.4
1901 Male, age 80, both hemispheres 32.3
2619 Male, age 74, both hemispheres 30.1
2042 Male, age 76, both hemispheres 29.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 11.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 11.4
Samples: 197

Max nTPM: 23.5
Min nTPM: 5.6
Std nTPM: 3.0
Median nTPM: 10.8
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 23.5
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 22.1
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 19.9
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 19.0
GTEX-ZAB4-0011-R1a-SM-4RGNO 40-49 years, male 18.4
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 18.0
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 17.9
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 17.9
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 17.8
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 17.6
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 17.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 50.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 50.9
FF:10153-102I9 76 years, female 56.1
FF:10169-103B7 60 years, female 45.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 53.3
Pig sample Sample description nTPM
Subiculum
nTPM: 45.5
Samples: 4

Max nTPM: 54.0
Min nTPM: 40.9
Sample A Female 45.0
Sample B Female 40.9
Sample C Male 41.9
Sample D Male 54.0
Dorsal hippocampus
nTPM: 45.6
Samples: 4

Max nTPM: 67.6
Min nTPM: 37.2
Sample A Female 40.0
Sample B Female 37.2
Sample C Male 67.6
Sample D Male 37.7
Entorhinal cortex
nTPM: 53.3
Samples: 4

Max nTPM: 62.1
Min nTPM: 48.7
Sample A Female 50.3
Sample B Female 62.1
Sample C Male 48.7
Sample D Male 52.1
Ventral hippocampus
nTPM: 34.8
Samples: 4

Max nTPM: 38.4
Min nTPM: 31.4
Sample A Female 35.0
Sample B Female 38.4
Sample C Male 31.4
Sample D Male 34.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 37.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 30.1
Samples: 4

Max nTPM: 33.3
Min nTPM: 28.5
Sample A Male 30.0
Sample B Male 28.7
Sample C Female 28.5
Sample D Female 33.3
Hippocampal formation
nTPM: 37.0
Samples: 4

Max nTPM: 43.8
Min nTPM: 31.7
Sample A Male 39.1
Sample B Male 43.8
Sample C Female 33.3
Sample D Female 31.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 12.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 12.5
71610829 Antisense, RP_050927_01_H08, Mouse strain C57BL/6J (56 days, male) 12.5

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