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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
1147.9
nTPM
Monaco:
555.6
nTPM
Schmiedel:
847.1
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
1147.9
HPA sample
nTPM
gdT-cell nTPM: 536.4
Samples: 6
Max nTPM: 609.3
Min nTPM: 443.4
P10809_1007
539.8
P10809_1022
521.5
P10809_1041
609.3
P10809_1060
443.4
P10809_1077
564.4
P10809_1098
540.2
MAIT T-cell nTPM: 908.0
Samples: 6
Max nTPM: 1071.7
Min nTPM: 739.7
P10809_1006
806.9
P10809_1024
1069.9
P10809_1043
739.7
P10809_1062
887.4
P10809_1083
872.2
P10809_1097
1071.7
Memory CD4 T-cell nTPM: 908.4
Samples: 6
Max nTPM: 1033.3
Min nTPM: 763.4
P10809_1014
1033.3
P10809_1026
930.2
P10809_1045
974.4
P10809_1064
819.6
P10809_1086
763.4
P10809_1113
929.6
Memory CD8 T-cell nTPM: 753.3
Samples: 5
Max nTPM: 805.3
Min nTPM: 685.3
P10809_1012
805.3
P10809_1027
752.1
P10809_1046
734.5
P10809_1065
685.3
P10809_1111
789.4
Naive CD4 T-cell nTPM: 987.9
Samples: 6
Max nTPM: 1182.7
Min nTPM: 882.6
P10809_1015
1182.7
P10809_1030
999.9
P10809_1049
951.6
P10809_1068
990.6
P10809_1085
882.6
P10809_1112
919.9
Naive CD8 T-cell nTPM: 894.4
Samples: 6
Max nTPM: 1230.9
Min nTPM: 612.7
P10809_1016
1230.9
P10809_1031
1003.4
P10809_1050
822.6
P10809_1069
793.7
P10809_1087
612.7
P10809_1110
902.8
T-reg nTPM: 1147.9
Samples: 6
Max nTPM: 1232.1
Min nTPM: 1088.4
P10809_1018
1088.4
P10809_1037
1232.1
P10809_1056
1103.2
P10809_1075
1193.6
P10809_1094
1101.3
P10809_1106
1168.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
555.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 441.7
Samples: 4
Max nTPM: 668.8
Min nTPM: 336.9
RHH5202_R3573
407.5
RHH5230_R3602
336.9
RHH5259_R3631
353.7
RHH5288_R3660
668.8
Effector memory CD8 T-cell nTPM: 295.9
Samples: 4
Max nTPM: 377.9
Min nTPM: 200.5
RHH5203_R3574
377.9
RHH5231_R3603
335.3
RHH5260_R3632
270.0
RHH5289_R3661
200.5
MAIT T-cell nTPM: 456.3
Samples: 4
Max nTPM: 702.2
Min nTPM: 338.6
RHH5233_R3605
428.9
RHH5205_R3576
338.6
RHH5262_R3634
355.5
RHH5297_R3663
702.2
Memory CD4 T-cell TFH nTPM: 535.7
Samples: 4
Max nTPM: 666.4
Min nTPM: 419.7
RHH5300_R3666
611.2
RHH5236_R3608
666.4
RHH5265_R3637
419.7
RHH5208_R3579
445.5
Memory CD4 T-cell Th1 nTPM: 523.9
Samples: 4
Max nTPM: 822.5
Min nTPM: 358.9
RHH5210_R3581
445.2
RHH5302_R3668
822.5
RHH5238_R3610
469.1
RHH5267_R3639
358.9
Memory CD4 T-cell Th1/Th17 nTPM: 495.8
Samples: 4
Max nTPM: 671.3
Min nTPM: 313.3
RHH5303_R3669
671.3
RHH5211_R3582
624.2
RHH5239_R3611
313.3
RHH5268_R3640
374.2
Memory CD4 T-cell Th17 nTPM: 391.0
Samples: 4
Max nTPM: 555.1
Min nTPM: 294.5
RHH5304_R3670
407.2
RHH5212_R3583
555.1
RHH5240_R3612
307.2
RHH5269_R3641
294.5
Memory CD4 T-cell Th2 nTPM: 483.0
Samples: 4
Max nTPM: 599.6
Min nTPM: 346.2
RHH5305_R3671
552.5
RHH5213_R3584
433.6
RHH5241_R3613
599.6
RHH5270_R3642
346.2
Naive CD4 T-cell nTPM: 517.5
Samples: 4
Max nTPM: 686.1
Min nTPM: 336.2
RHH5306_R3672
569.9
RHH5214_R3585
686.1
RHH5242_R3614
477.9
RHH5271_R3643
336.2
Naive CD8 T-cell nTPM: 471.6
Samples: 4
Max nTPM: 646.5
Min nTPM: 351.4
RHH5201_R3572
411.3
RHH5229_R3601
351.4
RHH5258_R3630
646.5
RHH5287_R3659
477.3
Non-Vd2 gdTCR nTPM: 339.3
Samples: 4
Max nTPM: 512.0
Min nTPM: 234.2
RHH5235_R3607
234.2
RHH5264_R3636
349.3
RHH5207_R3578
261.7
RHH5299_R3665
512.0
T-reg nTPM: 555.6
Samples: 4
Max nTPM: 827.1
Min nTPM: 373.4
RHH5301_R3667
827.1
RHH5237_R3609
551.9
RHH5266_R3638
373.4
RHH5209_R3580
469.9
Terminal effector memory CD4 T-cell nTPM: 332.0
Samples: 2
Max nTPM: 412.3
Min nTPM: 251.7
RHH5243_R3615
251.7
RHH5272_R3644
412.3
Terminal effector memory CD8 T-cell nTPM: 451.8
Samples: 4
Max nTPM: 784.0
Min nTPM: 285.1
RHH5232_R3604
319.4
RHH5204_R3575
784.0
RHH5261_R3633
285.1
RHH5296_R3662
418.7
Vd2 gdTCR nTPM: 512.0
Samples: 4
Max nTPM: 735.1
Min nTPM: 275.6
RHH5234_R3606
328.7
RHH5206_R3577
708.7
RHH5263_R3635
275.6
RHH5298_R3664
735.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.