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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
261.6
nTPM
Monaco:
620.3
nTPM
Schmiedel:
304.9
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
261.6
HPA sample
nTPM
gdT-cell nTPM: 111.2
Samples: 6
Max nTPM: 140.5
Min nTPM: 89.3
P10809_1007
89.3
P10809_1022
140.5
P10809_1041
113.6
P10809_1060
110.4
P10809_1077
96.0
P10809_1098
117.4
MAIT T-cell nTPM: 217.7
Samples: 6
Max nTPM: 282.6
Min nTPM: 191.7
P10809_1006
206.3
P10809_1024
282.6
P10809_1043
191.8
P10809_1062
218.9
P10809_1083
191.7
P10809_1097
214.8
Memory CD4 T-cell nTPM: 222.5
Samples: 6
Max nTPM: 253.1
Min nTPM: 206.9
P10809_1014
206.9
P10809_1026
216.9
P10809_1045
229.4
P10809_1064
219.8
P10809_1086
209.1
P10809_1113
253.1
Memory CD8 T-cell nTPM: 164.6
Samples: 5
Max nTPM: 219.0
Min nTPM: 141.0
P10809_1012
141.0
P10809_1027
159.6
P10809_1046
157.2
P10809_1065
146.3
P10809_1111
219.0
Naive CD4 T-cell nTPM: 261.7
Samples: 6
Max nTPM: 305.4
Min nTPM: 210.8
P10809_1015
210.8
P10809_1030
244.5
P10809_1049
305.4
P10809_1068
300.5
P10809_1085
235.5
P10809_1112
273.2
Naive CD8 T-cell nTPM: 170.2
Samples: 6
Max nTPM: 207.0
Min nTPM: 130.9
P10809_1016
142.5
P10809_1031
170.2
P10809_1050
175.4
P10809_1069
194.9
P10809_1087
130.9
P10809_1110
207.0
T-reg nTPM: 188.9
Samples: 6
Max nTPM: 263.9
Min nTPM: 146.8
P10809_1018
154.5
P10809_1037
186.2
P10809_1056
146.8
P10809_1075
190.6
P10809_1094
191.6
P10809_1106
263.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
620.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 443.7
Samples: 4
Max nTPM: 486.0
Min nTPM: 358.3
RHH5202_R3573
486.0
RHH5230_R3602
484.0
RHH5259_R3631
358.3
RHH5288_R3660
446.3
Effector memory CD8 T-cell nTPM: 399.2
Samples: 4
Max nTPM: 485.3
Min nTPM: 320.7
RHH5203_R3574
485.3
RHH5231_R3603
352.0
RHH5260_R3632
320.7
RHH5289_R3661
438.6
MAIT T-cell nTPM: 570.4
Samples: 4
Max nTPM: 660.1
Min nTPM: 480.9
RHH5233_R3605
592.7
RHH5205_R3576
660.1
RHH5262_R3634
548.0
RHH5297_R3663
480.9
Memory CD4 T-cell TFH nTPM: 620.3
Samples: 4
Max nTPM: 668.6
Min nTPM: 578.3
RHH5300_R3666
618.7
RHH5236_R3608
578.3
RHH5265_R3637
615.5
RHH5208_R3579
668.6
Memory CD4 T-cell Th1 nTPM: 443.2
Samples: 4
Max nTPM: 476.2
Min nTPM: 392.9
RHH5210_R3581
476.2
RHH5302_R3668
467.5
RHH5238_R3610
392.9
RHH5267_R3639
436.1
Memory CD4 T-cell Th1/Th17 nTPM: 544.1
Samples: 4
Max nTPM: 627.2
Min nTPM: 493.4
RHH5303_R3669
535.2
RHH5211_R3582
627.2
RHH5239_R3611
493.4
RHH5268_R3640
520.7
Memory CD4 T-cell Th17 nTPM: 581.9
Samples: 4
Max nTPM: 590.2
Min nTPM: 570.0
RHH5304_R3670
579.0
RHH5212_R3583
570.0
RHH5240_R3612
588.3
RHH5269_R3641
590.2
Memory CD4 T-cell Th2 nTPM: 538.4
Samples: 4
Max nTPM: 579.8
Min nTPM: 504.3
RHH5305_R3671
504.3
RHH5213_R3584
579.8
RHH5241_R3613
546.2
RHH5270_R3642
523.1
Naive CD4 T-cell nTPM: 474.3
Samples: 4
Max nTPM: 517.6
Min nTPM: 442.5
RHH5306_R3672
442.5
RHH5214_R3585
462.2
RHH5242_R3614
474.7
RHH5271_R3643
517.6
Naive CD8 T-cell nTPM: 437.4
Samples: 4
Max nTPM: 568.4
Min nTPM: 327.4
RHH5201_R3572
568.4
RHH5229_R3601
327.4
RHH5258_R3630
371.3
RHH5287_R3659
482.3
Non-Vd2 gdTCR nTPM: 273.9
Samples: 4
Max nTPM: 293.1
Min nTPM: 248.6
RHH5235_R3607
290.5
RHH5264_R3636
263.4
RHH5207_R3578
293.1
RHH5299_R3665
248.6
T-reg nTPM: 448.2
Samples: 4
Max nTPM: 510.6
Min nTPM: 403.2
RHH5301_R3667
469.4
RHH5237_R3609
403.2
RHH5266_R3638
409.6
RHH5209_R3580
510.6
Terminal effector memory CD4 T-cell nTPM: 371.7
Samples: 2
Max nTPM: 399.1
Min nTPM: 344.3
RHH5243_R3615
344.3
RHH5272_R3644
399.1
Terminal effector memory CD8 T-cell nTPM: 264.2
Samples: 4
Max nTPM: 282.7
Min nTPM: 227.5
RHH5232_R3604
265.8
RHH5204_R3575
282.7
RHH5261_R3633
227.5
RHH5296_R3662
280.7
Vd2 gdTCR nTPM: 429.5
Samples: 4
Max nTPM: 465.0
Min nTPM: 358.1
RHH5234_R3606
461.2
RHH5206_R3577
358.1
RHH5263_R3635
433.5
RHH5298_R3664
465.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.