We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
h
m
l
n
Glial cells:
Not detected
Neuronal cells:
Not detected
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
9.9
nTPM
HPA Brain:
120.1
nTPM
GTEx:
9.9
nTPM
FANTOM5:
48.8
Scaled Tags Per Million
Pig:
203.1
nTPM
Mouse:
72.7
nTPM
Allen mouse:
7.6
Expression energy
HIPPOCAMPUS - Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
Antibody HPA067632
Antibody CAB001964
Glial cells
Not detected
Not detected
Neuronal cells
Not detected
Not detected
HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM
120.1
Sample id
Sample description
nTPM
Hippocampus nTPM: 54.1
2148
Female, age 91, left hemisphere
63.4
1911
Female, age 85, right hemisphere
61.3
1898
Male, age 80, left hemisphere
60.9
2621
Female, age 67, right hemisphere
57.2
2529
Female, age 94, left hemisphere
46.1
1855
Male, age 76, left hemisphere
35.5
Dentate gyrus nTPM: 59.1
1927
Female, age 91, both hemispheres
126.0
2531
Female, age 67, both hemispheres
80.6
2246
Female, age 85, both hemispheres
51.6
2528
Male, age 74, both hemispheres
44.8
2010
Male, age 76, both hemispheres
28.4
2530
Female, age 94, left hemisphere
23.0
Entorhinal gyrus nTPM: 81.9
2613
Female, age 94, left hemisphere
102.5
1938
Female, age 85, left hemisphere
98.5
1787
Male, age 76, left hemisphere
96.4
2764
Male, age 80, right hemisphere
87.7
2686
Male, age 75, right hemisphere
59.6
2117
Female, age 91, right hemisphere
46.4
Hippocampus, CA1 nTPM: 69.5
2749
Male, age 80, left hemisphere
132.5
2045
Male, age 76, both hemispheres
70.3
2527
Male, age 74, both hemispheres
53.9
1873
Female, age 85, both hemispheres
46.0
2082
Female, age 91, right hemisphere
44.6
Hippocampus, CA2 nTPM: 63.7
1892
Male, age 76, both hemispheres
91.4
2437
Female, age 94, left hemisphere
76.6
1940
Female, age 85, left hemisphere
72.8
2113
Female, age 91, right hemisphere
57.8
2249
Male, age 74, both hemispheres
46.9
1963
Male, age 80, left hemisphere
36.9
Hippocampus, CA3 nTPM: 88.1
2137
Male, age 80, left hemisphere
158.7
2620
Female, age 94, left hemisphere
109.9
1867
Male, age 76, both hemispheres
85.2
1891
Female, age 85, both hemispheres
62.5
2436
Male, age 74, both hemispheres
58.8
2861
Female, age 67, both hemispheres
53.6
Parahippocampal cortex nTPM: 90.5
1990
Female, age 91, right hemisphere
121.1
2245
Female, age 91, both hemispheres
115.2
2250
Female, age 67, right hemisphere
111.6
1850
Male, age 80, both hemispheres
110.0
2693
Female, age 94, both hemispheres
104.1
2532
Female, age 72, left hemisphere
86.6
1933
Female, age 85, both hemispheres
73.8
2622
Female, age 67, right hemisphere
71.9
2018
Male, age 76, both hemispheres
63.6
2692
Male, age 74, both hemispheres
47.2
Perirhinal gyrus nTPM: 120.1
1847
Female, age 91, left hemisphere
141.9
1794
Male, age 80, right hemisphere
135.2
2521
Female, age 94, right hemisphere
120.0
1841
Female, age 85, right hemisphere
113.1
2848
Male, age 76, right hemisphere
90.3
Subiculum nTPM: 69.4
1901
Male, age 80, both hemispheres
100.7
1977
Female, age 85, both hemispheres
84.2
2438
Female, age 94, left hemisphere
74.4
2619
Male, age 74, both hemispheres
62.4
2042
Male, age 76, both hemispheres
51.6
2729
Female, age 91, right hemisphere
42.9
HIPPOCAMPAL FORMATION - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
9.9
GTEx sample id
Sample description
nTPM
Brain - Hippocampus Average nTPM: 9.9
Samples: 197
Max nTPM: 36.5
Min nTPM: 0.1
Std nTPM: 8.5
Median nTPM: 7.3
GTEX-RNOR-0011-R1A-SM-CNNP5
50-59 years, female
36.5
GTEX-12WSE-0011-R1b-SM-5GU4V
20-29 years, male
36.4
GTEX-144GL-0011-R1a-SM-5PNZ5
50-59 years, male
35.7
GTEX-14LLW-0011-R1a-SM-5ZZVD
70-79 years, female
35.1
GTEX-145MH-0011-R1b-SM-5PNWY
50-59 years, male
35.0
GTEX-WWYW-0011-R1A-SM-3TW8G
50-59 years, female
34.8
GTEX-16YQH-0011-R1a-SM-7LT8R
30-39 years, male
34.2
GTEX-12WSF-0011-R1a-SM-5DUVI
70-79 years, male
27.5
GTEX-14ABY-0011-R1a-SM-6EU2W
50-59 years, male
27.4
GTEX-1F48J-0011-R1a-SM-9QEIC
50-59 years, female
26.9
GTEX-1EWIQ-0011-R1a-SM-9OSX7
70-79 years, female
26.7
GTEX-Q2AG-0011-R1A-SM-2HMJI
40-49 years, female
25.1
GTEX-T6MN-0011-R1A-SM-32QOY
50-59 years, male
25.1
GTEX-12WSD-0011-R1b-SM-5LZVY
60-69 years, female
24.6
GTEX-R55E-0011-R1A-SM-2TC6N
20-29 years, male
24.6
GTEX-131XH-0011-R1a-SM-5DUWA
50-59 years, male
24.2
GTEX-1GF9W-0011-R1a-SM-9QEIQ
60-69 years, male
23.5
GTEX-1H3O1-0011-R1b-SM-CL554
60-69 years, male
23.2
GTEX-12WSH-0011-R1a-SM-5GU5V
50-59 years, male
23.0
GTEX-13FLW-0011-R1b-SM-5LZX2
50-59 years, male
22.7
GTEX-WL46-0011-R1A-SM-3LK6M
50-59 years, male
22.5
GTEX-13O3Q-0011-R1b-SM-5KM3L
50-59 years, male
21.6
GTEX-1CB4G-0011-R1b-SM-9QEHT
60-69 years, male
21.4
GTEX-PVOW-0011-R1A-SM-32PL6
40-49 years, male
21.2
GTEX-1313W-0011-R1b-SM-5EQ4A
50-59 years, female
20.8
GTEX-P44G-0011-R1A-SM-2I3FE
30-39 years, male
20.7
GTEX-Y8DK-0011-R1A-SM-4RGLO
60-69 years, male
20.5
GTEX-ZDXO-0011-R1a-SM-4WKF4
60-69 years, male
20.5
GTEX-1IY9M-0011-R1a-SM-EXURZ
60-69 years, male
20.2
GTEX-1F6I4-0011-R1a-SM-9OSWU
60-69 years, male
19.5
GTEX-ZAB4-0011-R1a-SM-4RGNO
40-49 years, male
18.7
GTEX-1ICLZ-0011-R1b-SM-A9SM3
60-69 years, male
18.7
GTEX-13OW6-0011-R1a-SM-5L3HQ
50-59 years, male
18.2
GTEX-YFC4-0011-R1a-SM-4V6EH
40-49 years, female
17.8
GTEX-1IOXB-0011-R1a-SM-D4P27
50-59 years, male
17.3
GTEX-1LG7Y-0011-R1a-SM-EYYWV
50-59 years, male
16.8
GTEX-14BIM-0011-R1a-SM-69LQI
60-69 years, female
16.4
GTEX-NL3H-0011-R1a-SM-48TDJ
60-69 years, male
16.3
GTEX-11GSP-0011-R1a-SM-9QEJ3
60-69 years, female
16.1
GTEX-13FXS-0011-R1a-SM-5K7U6
50-59 years, male
15.5
GTEX-1A8G6-0011-R1a-SM-7P8PC
60-69 years, male
15.5
GTEX-145LU-0011-R1a-SM-5Q5CE
50-59 years, male
15.4
GTEX-14C5O-0011-R1b-SM-6AJBW
60-69 years, male
15.2
GTEX-1B8SF-0011-R1b-SM-7P8Q8
60-69 years, male
14.9
GTEX-11GS4-0011-R1a-SM-DO129
60-69 years, male
14.7
GTEX-TSE9-0011-R1A-SM-3DB7E
60-69 years, female
14.6
GTEX-13NYB-0011-R1b-SM-5KM4F
40-49 years, male
14.3
GTEX-T5JC-0011-R1A-SM-32PM6
20-29 years, male
14.3
GTEX-1B8L1-0011-R1a-SM-7P8SS
60-69 years, male
14.3
GTEX-QDT8-0011-R1A-SM-32PKS
30-39 years, female
14.2
GTEX-1J1OQ-0011-R1a-SM-A9G1Z
40-49 years, female
13.9
GTEX-139T8-0011-R1a-SM-5HL75
60-69 years, male
13.6
GTEX-WZTO-0011-R1B-SM-3NMAR
40-49 years, male
13.6
GTEX-1HSMO-0011-R1a-SM-CM2SV
60-69 years, male
13.5
GTEX-16Z82-0011-R1b-SM-7EPHZ
60-69 years, male
13.3
GTEX-P44H-0011-R1A-SM-3NM8J
40-49 years, male
13.1
GTEX-1C6VR-0011-R1a-SM-7MXUE
60-69 years, male
13.1
GTEX-131YS-0011-R1a-SM-5DUXC
60-69 years, female
13.0
GTEX-13N2G-0011-R1b-SM-5MR3G
60-69 years, male
13.0
GTEX-WHSE-0011-R1A-SM-3P5ZK
20-29 years, male
13.0
GTEX-1H1ZS-0011-R1b-SM-A9G1E
70-79 years, male
13.0
GTEX-1A3MX-0011-R1b-SM-7P8PH
60-69 years, male
12.8
GTEX-1F75A-0011-R1b-SM-CE6RA
50-59 years, male
12.8
GTEX-1I1HK-0011-R1b-SM-CM2T7
60-69 years, male
12.7
GTEX-1GN73-0011-R1a-SM-CKZNT
60-69 years, male
12.3
GTEX-1IDJH-0011-R1b-SM-ARU6U
70-79 years, male
12.3
GTEX-13X6I-0011-R1b-SM-5PNZC
60-69 years, male
11.7
GTEX-11ONC-0011-R1a-SM-57WD4
60-69 years, male
11.3
GTEX-X585-0011-R1B-SM-46MVE
50-59 years, male
11.1
GTEX-13OW7-0011-R1b-SM-5L3HF
50-59 years, male
10.9
GTEX-NPJ7-0011-R1a-SM-3GACT
60-69 years, female
10.7
GTEX-15ER7-0011-R1b-SM-7KUE1
20-29 years, female
10.6
GTEX-14JIY-0011-R1a-SM-68713
60-69 years, male
10.4
GTEX-1HT8W-0011-R1b-SM-CJI3V
30-39 years, male
10.3
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y
40-49 years, male
10.2
GTEX-WVLH-0011-R1A-SM-4MVOK
50-59 years, male
10.1
GTEX-1IKK5-0011-R1b-SM-CE6SQ
60-69 years, male
10.1
GTEX-12ZZX-0011-R1a-SM-5EQ6B
40-49 years, female
9.9
GTEX-14PN4-0011-R1b-SM-69LP8
50-59 years, male
9.9
GTEX-ZF28-0011-R1a-SM-4WWD1
60-69 years, male
9.9
GTEX-14ASI-0011-R1b-SM-5S2TY
60-69 years, male
9.8
GTEX-S7SE-0011-R1A-SM-2XCDE
50-59 years, male
9.8
GTEX-1399T-0011-R1b-SM-5DUWN
60-69 years, male
9.4
GTEX-11DXW-0011-R1a-SM-DNZZD
40-49 years, male
9.3
GTEX-1HBPI-0011-R1b-SM-A9SKF
50-59 years, male
9.3
GTEX-13PDP-0011-R1a-SM-5PNX5
60-69 years, male
9.1
GTEX-15CHQ-0011-R1a-SM-COH27
60-69 years, male
8.8
GTEX-N7MS-0011-R1a-SM-2HMJG
60-69 years, male
8.6
GTEX-13JUV-0011-R1a-SM-5LZY4
40-49 years, female
8.2
GTEX-1B933-0011-R1b-SM-9QEGW
50-59 years, female
8.2
GTEX-QMR6-0011-R1A-SM-32PKW
50-59 years, male
8.0
GTEX-13SLW-0011-R1a-SM-5S2W7
70-79 years, male
7.8
GTEX-11EI6-0011-R1a-SM-DO93L
60-69 years, male
7.8
GTEX-17F97-0011-R1b-SM-7IGM9
50-59 years, male
7.7
GTEX-13N1W-0011-R1b-SM-5MR4T
70-79 years, male
7.6
GTEX-PWO3-0011-R1A-SM-2I5EW
60-69 years, female
7.6
GTEX-X4XX-0011-R1B-SM-3P622
60-69 years, male
7.5
GTEX-QVJO-0011-R1A-SM-2S1QI
60-69 years, female
7.4
GTEX-1H3VE-0011-R1a-SM-A9G1K
40-49 years, male
7.3
GTEX-1EKGG-0011-R1b-SM-9QEI1
60-69 years, male
7.0
GTEX-OHPN-0011-R1A-SM-2I5GB
60-69 years, female
6.8
GTEX-ZUA1-0011-R1a-SM-4YCE2
40-49 years, male
6.7
GTEX-1EMGI-0011-R1b-SM-9OSWZ
60-69 years, male
6.7
GTEX-14E6D-0011-R1b-SM-5YYAW
50-59 years, male
6.6
GTEX-13112-0011-R1b-SM-5HL7K
50-59 years, male
6.5
GTEX-1B996-0011-R1b-SM-7P8PO
60-69 years, male
6.3
GTEX-1F6IF-0011-R1b-SM-9WG78
60-69 years, male
6.2
GTEX-11UD1-0011-R1b-SM-5BC7D
40-49 years, female
6.1
GTEX-13FTY-0011-R1a-SM-5LZXE
40-49 years, female
6.1
GTEX-145LS-0011-R1b-SM-5PNUP
60-69 years, female
6.1
GTEX-17HG3-0011-R1a-SM-7LG6H
30-39 years, female
6.1
GTEX-14PJM-0011-R1a-SM-CNPO3
50-59 years, female
6.0
GTEX-1C64N-0011-R1b-SM-7P8Q7
50-59 years, male
6.0
GTEX-1I1GQ-0011-R1a-SM-CY8GG
50-59 years, male
5.9
GTEX-13G51-0011-R1a-SM-5LZYR
60-69 years, male
5.8
GTEX-1HSKV-0011-R1b-SM-CMKH7
60-69 years, male
5.8
GTEX-139TT-0011-R1a-SM-5LZVD
60-69 years, male
5.7
GTEX-1E1VI-0011-R1a-SM-ARZMM
50-59 years, male
5.7
GTEX-1EX96-0011-R1a-SM-CE6R5
50-59 years, male
5.5
GTEX-1GMR8-0011-R1b-SM-CJI2O
50-59 years, female
5.5
GTEX-N7MT-0011-R1a-SM-CNPO1
60-69 years, female
5.5
GTEX-13S7M-0011-R1b-SM-5PNZE
60-69 years, female
5.4
GTEX-12WSM-0011-R1a-SM-5LZW6
60-69 years, male
5.3
GTEX-132Q8-0011-R1a-SM-5EGLK
60-69 years, male
5.3
GTEX-15DCD-0011-R1b-SM-6LPIJ
70-79 years, female
5.3
GTEX-17JCI-0011-R1b-SM-718A3
60-69 years, female
5.0
GTEX-16XZZ-0011-R1a-SM-7LTAH
60-69 years, male
4.9
GTEX-13RTL-0011-R1a-SM-5PNZ8
40-49 years, male
4.8
GTEX-ZVZQ-0011-R1a-SM-57WBU
60-69 years, female
4.8
GTEX-1J8Q2-0011-R1a-SM-D4P2D
60-69 years, male
4.8
GTEX-ZE7O-0011-R1a-SM-57WDM
50-59 years, female
4.7
GTEX-13O3O-0011-R1b-SM-5KM2K
60-69 years, female
4.6
GTEX-17HHY-0011-R1a-SM-7189V
50-59 years, male
4.6
GTEX-1I1GS-0011-R1a-SM-CJI43
60-69 years, male
4.6
GTEX-1AX9I-0011-R1b-SM-7RHG2
60-69 years, male
4.5
GTEX-13OVJ-0011-R1b-SM-5L3I6
50-59 years, female
4.4
GTEX-1GN1U-0011-R1a-SM-CJI25
50-59 years, female
4.4
GTEX-1LB8K-0011-R1b-SM-EZ6MV
50-59 years, male
4.4
GTEX-13FHP-0011-R1b-SM-5K7XL
50-59 years, male
4.2
GTEX-1F75W-0011-R1a-SM-ARU81
60-69 years, male
4.1
GTEX-1H3NZ-0011-R1a-SM-CKZP5
60-69 years, male
4.0
GTEX-UTHO-0011-R1A-SM-3GIJO
60-69 years, male
3.8
GTEX-17HII-0011-R1b-SM-7MGVW
50-59 years, male
3.7
GTEX-1H1CY-0011-R1a-SM-CKZOZ
60-69 years, female
3.7
GTEX-14PQA-0011-R1b-SM-6EU1G
50-59 years, female
3.6
GTEX-11WQC-0011-R1b-SM-DO932
60-69 years, male
3.5
GTEX-144GO-0011-R1a-SM-5PNWO
60-69 years, male
3.4
GTEX-11GSO-0011-R1b-SM-57WD3
60-69 years, male
3.3
GTEX-14PJO-0011-R1b-SM-6AJAK
60-69 years, male
3.3
GTEX-YJ89-0011-R1a-SM-4RGLS
60-69 years, male
3.3
GTEX-1H1DG-0011-R1b-SM-CKZP1
70-79 years, male
3.3
GTEX-1CAV2-0011-R1a-SM-ARZML
40-49 years, female
3.2
GTEX-13FHO-0011-R1b-SM-5KLZG
60-69 years, male
3.1
GTEX-13NZ8-0011-R1b-SM-5KM3V
60-69 years, female
2.9
GTEX-1GTWX-0011-R1a-SM-CE6RL
60-69 years, male
2.8
GTEX-14E7W-0011-R1b-SM-5YYAT
70-79 years, male
2.7
GTEX-QVUS-0011-R1A-SM-3GAD2
60-69 years, female
2.7
GTEX-1EH9U-0011-R1b-SM-CJI2B
60-69 years, male
2.7
GTEX-1GF9V-0011-R1a-SM-CKZNQ
60-69 years, male
2.6
GTEX-1HGF4-0011-R1a-SM-CJI3S
60-69 years, male
2.6
GTEX-1HR98-0011-R1a-SM-ARZLQ
60-69 years, male
2.4
GTEX-13NYS-0011-R1b-SM-5MR55
60-69 years, male
2.3
GTEX-13OW8-0011-R1a-SM-5L3HI
60-69 years, male
2.3
GTEX-13CF2-0011-R1a-SM-5LZY1
60-69 years, male
2.2
GTEX-17MF6-0011-R1a-SM-72D6O
40-49 years, male
2.0
GTEX-X4EP-0011-R1A-SM-3P624
60-69 years, female
2.0
GTEX-1BAJH-0011-R1a-SM-7P8SV
70-79 years, male
2.0
GTEX-17EVP-0011-R1a-SM-7DHLA
40-49 years, male
1.7
GTEX-15UF6-0011-R1a-SM-9QEGH
70-79 years, female
1.7
GTEX-13RTJ-0011-R1a-SM-5O9D9
60-69 years, male
1.6
GTEX-16NPV-0011-R1b-SM-7MGVZ
50-59 years, female
1.6
GTEX-1E2YA-0011-R1b-SM-CJI29
50-59 years, male
1.6
GTEX-14LZ3-0011-R1a-SM-69LP5
60-69 years, female
1.5
GTEX-1C6VQ-0011-R1a-SM-7P8Q2
50-59 years, male
1.5
GTEX-1212Z-0011-R1b-SM-5BC72
60-69 years, male
1.4
GTEX-13OVL-0011-R1a-SM-5L3H5
50-59 years, male
1.4
GTEX-13QJC-0011-R1b-SM-5S2UU
60-69 years, female
1.4
GTEX-16GPK-0011-R1b-SM-7EWDH
60-69 years, male
1.4
GTEX-NPJ8-0011-R1a-SM-33HCB
40-49 years, male
1.4
GTEX-1GZHY-0011-R1a-SM-CE6RR
50-59 years, female
1.3
GTEX-183WM-0011-R1a-SM-718A8
70-79 years, female
1.1
GTEX-1A32A-0011-R1a-SM-7P8SQ
50-59 years, female
1.1
GTEX-11ZTS-0011-R1a-SM-5BC71
60-69 years, female
1.0
GTEX-XMD1-0011-R1A-SM-4AT4C
60-69 years, male
1.0
GTEX-1GN2E-0011-R1b-SM-CE6RJ
60-69 years, male
1.0
GTEX-13JVG-0011-R1a-SM-5KM32
60-69 years, male
0.8
GTEX-1I1GV-0011-R1a-SM-CL559
60-69 years, male
0.8
GTEX-11ZVC-0011-R1b-SM-5BC6M
50-59 years, female
0.7
GTEX-17EVQ-0011-R1a-SM-7189S
70-79 years, male
0.7
GTEX-1H4P4-0011-R1b-SM-CL54V
50-59 years, male
0.6
GTEX-13OW5-0011-R1b-SM-5L3GE
60-69 years, male
0.5
GTEX-13NZA-0011-R1b-SM-5LUAF
60-69 years, male
0.3
GTEX-13QIC-0011-R1a-SM-5O9CJ
60-69 years, female
0.3
GTEX-1H23P-0011-R1a-SM-ACKVC
60-69 years, male
0.3
GTEX-11TUW-0011-R1a-SM-DO92S
60-69 years, male
0.2
GTEX-18A6Q-0011-R1b-SM-731DI
60-69 years, male
0.1
GTEX-1CB4J-0011-R1a-SM-9WG64
60-69 years, male
0.1
Show allShow less
HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
72.7
Mouse sample
Sample description
nTPM
Entorhinal cortex nTPM: 72.6
Samples: 4
Max nTPM: 78.8
Min nTPM: 61.0
Sample A
Male
74.9
Sample B
Male
75.8
Sample C
Female
61.0
Sample D
Female
78.8
Hippocampal formation nTPM: 51.0
Samples: 4
Max nTPM: 57.5
Min nTPM: 45.7
Sample A
Male
50.8
Sample B
Male
57.5
Sample C
Female
50.1
Sample D
Female
45.7
HIPPOCAMPAL FORMATION - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.