HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
RNA expressioni
Consensus:25.5 nTPM
HPA Brain:36.0 nTPM
GTEx:25.5 nTPM
FANTOM5:21.0 Scaled Tags Per Million
Pig:24.1 nTPM
Mouse:17.3 nTPM
Allen mouse:8.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA037893Antibody HPA037894
Glial cells LowNot detected
Neuronal cells Not detectedNot detected




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 36.0
Sample id Sample description nTPM
Hippocampus
nTPM: 36.0
1855 Male, age 76, left hemisphere 39.8
1898 Male, age 80, left hemisphere 38.3
2621 Female, age 67, right hemisphere 37.1
2148 Female, age 91, left hemisphere 36.3
2529 Female, age 94, left hemisphere 35.6
1911 Female, age 85, right hemisphere 28.8
Dentate gyrus
nTPM: 34.9
2010 Male, age 76, both hemispheres 42.7
2530 Female, age 94, left hemisphere 41.0
2531 Female, age 67, both hemispheres 33.0
2528 Male, age 74, both hemispheres 32.9
2246 Female, age 85, both hemispheres 32.1
1927 Female, age 91, both hemispheres 27.7
Entorhinal gyrus
nTPM: 34.0
2117 Female, age 91, right hemisphere 37.0
1787 Male, age 76, left hemisphere 36.6
2764 Male, age 80, right hemisphere 33.3
2686 Male, age 75, right hemisphere 33.0
1938 Female, age 85, left hemisphere 32.6
2613 Female, age 94, left hemisphere 31.5
Hippocampus, CA1
nTPM: 34.8
2045 Male, age 76, both hemispheres 39.4
2527 Male, age 74, both hemispheres 36.9
2082 Female, age 91, right hemisphere 33.6
2749 Male, age 80, left hemisphere 33.5
1873 Female, age 85, both hemispheres 30.6
Hippocampus, CA2
nTPM: 35.0
2437 Female, age 94, left hemisphere 42.5
1963 Male, age 80, left hemisphere 35.4
2113 Female, age 91, right hemisphere 34.0
1892 Male, age 76, both hemispheres 33.8
1940 Female, age 85, left hemisphere 32.2
2249 Male, age 74, both hemispheres 31.9
Hippocampus, CA3
nTPM: 34.3
1867 Male, age 76, both hemispheres 40.1
2861 Female, age 67, both hemispheres 39.7
2436 Male, age 74, both hemispheres 35.6
2620 Female, age 94, left hemisphere 32.4
2137 Male, age 80, left hemisphere 31.0
1891 Female, age 85, both hemispheres 27.2
Parahippocampal cortex
nTPM: 33.7
2018 Male, age 76, both hemispheres 44.0
2622 Female, age 67, right hemisphere 37.4
2245 Female, age 91, both hemispheres 35.4
2532 Female, age 72, left hemisphere 33.9
2692 Male, age 74, both hemispheres 32.9
1990 Female, age 91, right hemisphere 32.3
1850 Male, age 80, both hemispheres 31.7
2250 Female, age 67, right hemisphere 30.4
1933 Female, age 85, both hemispheres 29.6
2693 Female, age 94, both hemispheres 28.8
Perirhinal gyrus
nTPM: 31.8
1847 Female, age 91, left hemisphere 32.7
1794 Male, age 80, right hemisphere 32.5
2521 Female, age 94, right hemisphere 32.3
2848 Male, age 76, right hemisphere 31.6
1841 Female, age 85, right hemisphere 30.2
Subiculum
nTPM: 35.2
2438 Female, age 94, left hemisphere 39.8
2042 Male, age 76, both hemispheres 39.6
2619 Male, age 74, both hemispheres 36.1
2729 Female, age 91, right hemisphere 34.0
1901 Male, age 80, both hemispheres 31.5
1977 Female, age 85, both hemispheres 30.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 25.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 25.5
Samples: 197

Max nTPM: 75.4
Min nTPM: 17.6
Std nTPM: 5.6
Median nTPM: 25.0
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 75.4
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 46.5
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 42.4
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 37.2
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 36.9
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 35.5
GTEX-1EH9U-0011-R1b-SM-CJI2B 60-69 years, male 35.4
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 34.7
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 34.6
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 33.7
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 33.5
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 21.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 21.0
FF:10153-102I9 76 years, female 25.4
FF:10169-103B7 60 years, female 16.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 24.1
Pig sample Sample description nTPM
Subiculum
nTPM: 19.7
Samples: 4

Max nTPM: 26.1
Min nTPM: 14.6
Sample A Female 26.1
Sample B Female 18.2
Sample C Male 20.0
Sample D Male 14.6
Dorsal hippocampus
nTPM: 24.1
Samples: 4

Max nTPM: 30.6
Min nTPM: 20.1
Sample A Female 30.6
Sample B Female 22.7
Sample C Male 23.0
Sample D Male 20.1
Entorhinal cortex
nTPM: 20.4
Samples: 4

Max nTPM: 21.5
Min nTPM: 19.4
Sample A Female 21.5
Sample B Female 20.3
Sample C Male 19.4
Sample D Male 20.4
Ventral hippocampus
nTPM: 23.2
Samples: 4

Max nTPM: 31.2
Min nTPM: 17.4
Sample A Female 22.6
Sample B Female 17.4
Sample C Male 31.2
Sample D Male 21.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 17.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 16.5
Samples: 4

Max nTPM: 17.2
Min nTPM: 15.9
Sample A Male 16.4
Sample B Male 17.2
Sample C Female 15.9
Sample D Female 16.4
Hippocampal formation
nTPM: 17.3
Samples: 4

Max nTPM: 19.2
Min nTPM: 16.0
Sample A Male 16.0
Sample B Male 16.6
Sample C Female 17.5
Sample D Female 19.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 8.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 8.3
68443063 Antisense, RP_050111_01_C09, Mouse strain C57BL/6J (56 days, male) 8.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org