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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
36.1
nTPM
Monaco:
19.0
nTPM
Schmiedel:
8.2
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
36.1
HPA sample
nTPM
gdT-cell nTPM: 11.3
Samples: 6
Max nTPM: 14.9
Min nTPM: 8.6
P10809_1007
8.6
P10809_1022
11.8
P10809_1041
11.0
P10809_1060
14.9
P10809_1077
9.0
P10809_1098
12.5
MAIT T-cell nTPM: 26.7
Samples: 6
Max nTPM: 32.3
Min nTPM: 17.1
P10809_1006
32.3
P10809_1024
30.1
P10809_1043
25.3
P10809_1062
17.1
P10809_1083
23.0
P10809_1097
32.3
Memory CD4 T-cell nTPM: 21.9
Samples: 6
Max nTPM: 36.5
Min nTPM: 12.4
P10809_1014
17.0
P10809_1026
36.5
P10809_1045
22.3
P10809_1064
12.4
P10809_1086
16.7
P10809_1113
26.4
Memory CD8 T-cell nTPM: 14.6
Samples: 5
Max nTPM: 22.9
Min nTPM: 5.1
P10809_1012
14.7
P10809_1027
5.1
P10809_1046
13.7
P10809_1065
16.5
P10809_1111
22.9
Naive CD4 T-cell nTPM: 17.7
Samples: 6
Max nTPM: 21.5
Min nTPM: 12.6
P10809_1015
16.5
P10809_1030
21.5
P10809_1049
20.6
P10809_1068
15.7
P10809_1085
12.6
P10809_1112
19.3
Naive CD8 T-cell nTPM: 11.3
Samples: 6
Max nTPM: 16.3
Min nTPM: 7.7
P10809_1016
11.2
P10809_1031
12.9
P10809_1050
11.2
P10809_1069
8.2
P10809_1087
7.7
P10809_1110
16.3
T-reg nTPM: 36.1
Samples: 6
Max nTPM: 52.9
Min nTPM: 22.2
P10809_1018
31.7
P10809_1037
22.2
P10809_1056
45.4
P10809_1075
38.4
P10809_1094
26.2
P10809_1106
52.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
19.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 9.8
Samples: 4
Max nTPM: 14.2
Min nTPM: 4.2
RHH5202_R3573
10.2
RHH5230_R3602
14.2
RHH5259_R3631
4.2
RHH5288_R3660
10.5
Effector memory CD8 T-cell nTPM: 8.8
Samples: 4
Max nTPM: 12.6
Min nTPM: 0.5
RHH5203_R3574
11.5
RHH5231_R3603
10.6
RHH5260_R3632
12.6
RHH5289_R3661
0.5
MAIT T-cell nTPM: 15.3
Samples: 4
Max nTPM: 27.7
Min nTPM: 7.0
RHH5233_R3605
7.0
RHH5205_R3576
14.4
RHH5262_R3634
27.7
RHH5297_R3663
11.9
Memory CD4 T-cell TFH nTPM: 15.7
Samples: 4
Max nTPM: 21.3
Min nTPM: 9.7
RHH5300_R3666
10.6
RHH5236_R3608
21.2
RHH5265_R3637
21.3
RHH5208_R3579
9.7
Memory CD4 T-cell Th1 nTPM: 10.3
Samples: 4
Max nTPM: 16.9
Min nTPM: 3.9
RHH5210_R3581
8.1
RHH5302_R3668
16.9
RHH5238_R3610
3.9
RHH5267_R3639
12.4
Memory CD4 T-cell Th1/Th17 nTPM: 16.6
Samples: 4
Max nTPM: 22.9
Min nTPM: 12.3
RHH5303_R3669
12.3
RHH5211_R3582
16.8
RHH5239_R3611
14.4
RHH5268_R3640
22.9
Memory CD4 T-cell Th17 nTPM: 18.1
Samples: 4
Max nTPM: 19.2
Min nTPM: 16.9
RHH5304_R3670
16.9
RHH5212_R3583
18.0
RHH5240_R3612
18.3
RHH5269_R3641
19.2
Memory CD4 T-cell Th2 nTPM: 15.4
Samples: 4
Max nTPM: 17.5
Min nTPM: 12.3
RHH5305_R3671
12.3
RHH5213_R3584
14.3
RHH5241_R3613
17.5
RHH5270_R3642
17.3
Naive CD4 T-cell nTPM: 10.1
Samples: 4
Max nTPM: 12.6
Min nTPM: 5.8
RHH5306_R3672
12.6
RHH5214_R3585
5.8
RHH5242_R3614
11.0
RHH5271_R3643
11.1
Naive CD8 T-cell nTPM: 10.7
Samples: 4
Max nTPM: 18.3
Min nTPM: 6.5
RHH5201_R3572
7.0
RHH5229_R3601
6.5
RHH5258_R3630
18.3
RHH5287_R3659
10.8
Non-Vd2 gdTCR nTPM: 6.7
Samples: 4
Max nTPM: 12.3
Min nTPM: 1.5
RHH5235_R3607
1.8
RHH5264_R3636
11.0
RHH5207_R3578
12.3
RHH5299_R3665
1.5
T-reg nTPM: 19.1
Samples: 4
Max nTPM: 30.8
Min nTPM: 12.0
RHH5301_R3667
17.4
RHH5237_R3609
16.0
RHH5266_R3638
30.8
RHH5209_R3580
12.0
Terminal effector memory CD4 T-cell nTPM: 12.5
Samples: 2
Max nTPM: 17.1
Min nTPM: 7.9
RHH5243_R3615
17.1
RHH5272_R3644
7.9
Terminal effector memory CD8 T-cell nTPM: 7.6
Samples: 4
Max nTPM: 10.3
Min nTPM: 5.4
RHH5232_R3604
9.1
RHH5204_R3575
5.4
RHH5261_R3633
10.3
RHH5296_R3662
5.7
Vd2 gdTCR nTPM: 8.6
Samples: 4
Max nTPM: 11.3
Min nTPM: 6.7
RHH5234_R3606
6.7
RHH5206_R3577
7.4
RHH5263_R3635
9.0
RHH5298_R3664
11.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
