HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:37.1 nTPM
HPA Brain:102.5 nTPM
GTEx:37.1 nTPM
FANTOM5:67.7 Scaled Tags Per Million
Pig:24.4 nTPM
Mouse:21.3 nTPM
Allen mouse:0.6 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 102.5
Sample id Sample description nTPM
Hippocampus
nTPM: 102.5
2148 Female, age 91, left hemisphere 138.2
1911 Female, age 85, right hemisphere 106.1
2529 Female, age 94, left hemisphere 102.5
1898 Male, age 80, left hemisphere 101.3
1855 Male, age 76, left hemisphere 88.6
2621 Female, age 67, right hemisphere 78.3
Dentate gyrus
nTPM: 98.4
2528 Male, age 74, both hemispheres 145.7
2246 Female, age 85, both hemispheres 112.3
1927 Female, age 91, both hemispheres 109.3
2530 Female, age 94, left hemisphere 84.3
2531 Female, age 67, both hemispheres 74.8
2010 Male, age 76, both hemispheres 64.1
Entorhinal gyrus
nTPM: 96.0
2117 Female, age 91, right hemisphere 125.7
2686 Male, age 75, right hemisphere 101.1
1787 Male, age 76, left hemisphere 94.8
1938 Female, age 85, left hemisphere 91.5
2764 Male, age 80, right hemisphere 86.5
2613 Female, age 94, left hemisphere 76.6
Hippocampus, CA1
nTPM: 83.9
2527 Male, age 74, both hemispheres 115.2
1873 Female, age 85, both hemispheres 99.6
2082 Female, age 91, right hemisphere 86.1
2749 Male, age 80, left hemisphere 62.1
2045 Male, age 76, both hemispheres 56.5
Hippocampus, CA2
nTPM: 97.2
1940 Female, age 85, left hemisphere 138.8
1963 Male, age 80, left hemisphere 114.0
2437 Female, age 94, left hemisphere 92.6
2249 Male, age 74, both hemispheres 88.5
2113 Female, age 91, right hemisphere 85.7
1892 Male, age 76, both hemispheres 63.5
Hippocampus, CA3
nTPM: 91.7
2861 Female, age 67, both hemispheres 119.7
2620 Female, age 94, left hemisphere 111.9
1891 Female, age 85, both hemispheres 99.2
2436 Male, age 74, both hemispheres 82.5
2137 Male, age 80, left hemisphere 71.0
1867 Male, age 76, both hemispheres 66.4
Parahippocampal cortex
nTPM: 86.8
2692 Male, age 74, both hemispheres 120.6
1933 Female, age 85, both hemispheres 100.1
2622 Female, age 67, right hemisphere 95.3
1850 Male, age 80, both hemispheres 84.6
2250 Female, age 67, right hemisphere 80.8
1990 Female, age 91, right hemisphere 80.2
2693 Female, age 94, both hemispheres 78.9
2018 Male, age 76, both hemispheres 77.7
2245 Female, age 91, both hemispheres 75.8
2532 Female, age 72, left hemisphere 73.9
Perirhinal gyrus
nTPM: 74.8
1794 Male, age 80, right hemisphere 86.2
2521 Female, age 94, right hemisphere 76.9
1847 Female, age 91, left hemisphere 73.1
1841 Female, age 85, right hemisphere 71.0
2848 Male, age 76, right hemisphere 66.9
Subiculum
nTPM: 96.5
2729 Female, age 91, right hemisphere 141.7
2619 Male, age 74, both hemispheres 117.7
2438 Female, age 94, left hemisphere 87.6
1901 Male, age 80, both hemispheres 82.3
1977 Female, age 85, both hemispheres 78.4
2042 Male, age 76, both hemispheres 71.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 37.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 37.1
Samples: 197

Max nTPM: 88.3
Min nTPM: 6.7
Std nTPM: 15.2
Median nTPM: 34.0
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 88.3
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 83.4
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 80.4
GTEX-17JCI-0011-R1b-SM-718A3 60-69 years, female 78.5
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 78.4
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 75.6
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 71.2
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 69.6
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 67.4
GTEX-ZDXO-0011-R1a-SM-4WKF4 60-69 years, male 64.7
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 64.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 67.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 67.7
FF:10153-102I9 76 years, female 82.5
FF:10169-103B7 60 years, female 52.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 24.4
Pig sample Sample description nTPM
Subiculum
nTPM: 19.2
Samples: 4

Max nTPM: 23.0
Min nTPM: 17.2
Sample A Female 23.0
Sample B Female 17.2
Sample C Male 18.7
Sample D Male 18.0
Dorsal hippocampus
nTPM: 17.9
Samples: 4

Max nTPM: 19.0
Min nTPM: 16.1
Sample A Female 18.9
Sample B Female 16.1
Sample C Male 19.0
Sample D Male 17.4
Entorhinal cortex
nTPM: 24.4
Samples: 4

Max nTPM: 26.6
Min nTPM: 21.8
Sample A Female 26.6
Sample B Female 24.9
Sample C Male 24.2
Sample D Male 21.8
Ventral hippocampus
nTPM: 19.2
Samples: 4

Max nTPM: 22.1
Min nTPM: 16.7
Sample A Female 18.8
Sample B Female 16.7
Sample C Male 22.1
Sample D Male 19.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 21.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 21.3
Samples: 4

Max nTPM: 21.8
Min nTPM: 20.7
Sample A Male 21.6
Sample B Male 21.2
Sample C Female 21.8
Sample D Female 20.7
Hippocampal formation
nTPM: 20.6
Samples: 4

Max nTPM: 22.7
Min nTPM: 17.5
Sample A Male 21.8
Sample B Male 20.5
Sample C Female 17.5
Sample D Female 22.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.6
73712870 Antisense, RP_051206_02_E11, Mouse strain C57BL/6J (56 days, male) 0.6

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